Cyanistes caeruleus (blue tit): 111944419
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Entry
111944419 CDS
T05602
Name
(RefSeq) double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03440
Homologous recombination
ccae03450
Non-homologous end-joining
ccae04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111944419
03450 Non-homologous end-joining
111944419
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111944419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccae03032
]
111944419
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111944419
DNA replication proteins [BR:
ccae03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111944419
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111944419
BRCA1-C complex
111944419
NHEJ (non-homologous end-joining)
MRX complex
111944419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
111944419
NCBI-ProteinID:
XP_023802945
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
DDEDTFKILIATDIHLGYLEKDPVRGNDTFVTFNEILDQAQKNEVDFILLGGDLFHDNKP
SRKTVHSCLESLRKYCMGDRPVQFEILSDQAVNFNYSKFPWVNYQDENLNISIPVFSIHG
NHDDPTGADALCALDILSCAGLLNHFGRSASVEKIDISPILLRKGRTKIALYGLGAIPDE
RLYRMFVNKQVTMLRPKEDEDSWFNLFVIHQNRSKHGATNYIPEQFLDDFINLVVWGHEH
ECKIAPFQNEQQRFYISQPGSSVVTSLSPGEAVKKHIGLLHVKGKKMKMEKIALETVRTF
HIEDIVLADHPDLFNPDNPNVTQAIQAFCMEKVELMLDTAERERLGNPRQPEKPIIRLRV
DYAGGFEPFSVHRFSQKYMHRVANPKDIIHFFRHREQKEKKDIDLNFGKLVSRPTEGTAL
RVEDLVKQYFQTAEKKVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKFQLEKTQRFLKE
RHTDAEEGKIDEEVRKFRESRKKNTEEEDKEVREAMIRARAHRSEDEVLVSASSDEDSMD
MESISPGDGLSSTLSRGRGRARGRARGARGQNSTARGSSRRGRGTTSQESASGSRSYKPV
SMPSKNMSIVDAFKSSKRDHSLNSFQSYSEDIIDVDSDPEDTSFVPSSSKANQRLPAVSS
LSKRGSQSQASRGVDFESDEDDPFMSPATSRRTK
NT seq
2086 nt
NT seq
+upstream
nt +downstream
nt
ggatgatgaagatacctttaaaatactcattgctactgatattcatcttggctatttgga
gaaggatccagttcgtggaaatgatacatttgtgactttcaatgaaattctggaccaggc
tcaaaaaaatgaagtggacttcattttattgggtggggacctttttcatgacaacaaacc
ctccagaaaaacagtacactcttgtttggagtcactaagaaaatactgcatgggtgatcg
tccagttcagtttgaaattttgagtgatcaggcagttaattttaattacagcaagtttcc
ttgggtgaattatcaggatgaaaatctcaacatttctattccagtttttagtattcatgg
caatcatgatgatcccacaggggcagatgcactgtgtgcattggatattttaagctgtgc
aggcctgctgaatcactttggacgttcagcttccgtggagaaaatagatattagtcccat
tttattgcgtaaaggtagaacaaaaattgctctgtatggcttgggagctattccagatga
gaggttgtatcgtatgtttgtcaataagcaagtaaccatgctgagaccaaaggaagatga
agatagttggtttaacttgtttgtgattcatcaaaataggagcaaacatggagctaccaa
ctacattccagagcagtttttagatgactttattaatcttgttgtgtggggtcatgaaca
tgagtgcaaaatagctccattccaaaatgaacagcaacgtttctacatttctcagccagg
aagttcagtggtgacatctctgtcccctggagaagccgtgaagaaacacattggtttgct
gcatgttaaagggaaaaaaatgaaaatggagaagattgctctagagacagtgcgaacttt
ccatatagaggatattgttctagccgatcatccagatctttttaatcctgacaatcctaa
tgttactcaggcaatacaggcattctgcatggaaaaggtggaattgatgctggacactgc
agaaagagaacgcttgggaaatccccgtcagccagagaagcctatcataagattaagagt
tgattatgcaggtggctttgagccattcagtgtccatcgtttcagccagaagtacatgca
tagggtggctaacccaaaagacatcatacattttttcaggcatcgtgaacagaaagagaa
aaaagacattgatcttaattttggaaaactggttagcagacctactgagggaacggcact
gagggtggaagaccttgtaaagcagtatttccagacagcagagaagaaagtacagctttc
acttctaactgaaagaggaatgggagaagcagtgcaagagtttgtggacaaagaggaaaa
ggatgccatagaagagctggtgaaatttcaactagaaaaaacgcagaggtttctcaagga
gcgtcacactgatgcagaggaaggaaaaatagatgaggaggtgcgaaaattcagggaaag
tagaaaaaagaatactgaagaagaggataaggaagtccgtgaggcaatgatcagggccag
agcccaccggtctgaggatgaagttctggtctcagcctccagtgatgaagattccatgga
tatggaatctattagtccaggtgatggcctttcttcaacactgagccgaggaaggggtcg
ggcaagaggtagagcaagaggtgcaagaggacaaaattcaacagcaagaggttcatctcg
aagaggaagaggaaccactagccaagagtcagcttctggcagcagatcctacaagcctgt
atctatgcctagcaagaatatgtctattgtggatgcctttaagtcttcgaaaagagacca
ctctttaaattcgttccagtcttactctgaggatattatagatgttgattctgatccaga
agatacttcttttgttccttcttcttccaaagcaaatcaaaggttgccagctgtatcttc
acttagtaaaagaggttcacaaagccaagcatctaggggagttgattttgagtcagatga
ggatgatccattcatgagccctgcaacatcaagaagaactaagtga
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