Cyanistes caeruleus (blue tit): 111944813 Help Entry 111944813         CDS       T05602                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04510   Focal adhesion ccae04512   ECM-receptor interaction ccae04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccae00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111944813 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111944813 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111944813 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ccae04147]     111944813 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:ccae00536]     111944813 (COL4A1) Exosome [BR:ccae04147]  Exosomal proteins   Exosomal proteins of other cancer cells    111944813 (COL4A1) Glycosaminoglycan binding proteins [BR:ccae00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111944813 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  111944813 NCBI-ProteinID:  XP_023803267 LinkDB All DBs Position 1 AA seq 1720 aa AA seqDB search MGRSSWEGRMGLCVGDVCAVQGQPLLQGVMQHCSVCAEELLPAPVQSLPAGQPYLKKPQC FLSNARSGLGELKGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEGPPGPPGLK GDTGEPGLPGTKGTRGPPGVSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPVGPP GLPGLTGSIGPPGPPGMKGDPGDVIGLISPGVLKGEKGFPGQPGLPGPPGASGFQGPMGP QGPPGEQGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHMKEKGSEIIK GEKGDPGEKGEQGIPGLPGSGFKGDKGEPGKPGPRGKPGKDGEPGLKGEPGLPGGFGIPG RPGDPGTKGDKGERGYPGPPGRMIDAGPIDTFGEKGDPGVSGLPGLKGQKGEKGFPGAQG IPGPPGRPIPDRVGSPGVPGERGEKGEKGSPGFPSPGIPGRDGFPGPPGLPGPPGPPGIA DGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGEACALCDKVGPPGLPGPQGLPGPA GFPGQAGFKGDRGLPGLDGLPGVPGPPGAPGLTGSPGAKGEPGDFTYDSILKGEKGDPGF PGQPGAPGRDGRPGKDGFPGLQGPKGAAGTAGLKGERGPPGQPGFPGVRGERGFPGPPGI GAAGLPGEKGDRGFAGTPGLPGLPGAKGEAGRTISLPGPPGADGLPGPPGFPGPQGDKGN PGLPGIPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGVPGLQ GQKGEPGVGLPGPKGLPGPPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGFRGDPGLPG LQGLQGPPGAPGLGPPGLPGPAGQPGPQGPPGFPGVKGERGFPGVPGLDMPGPKGDKGSP GQPGVPGSVGLPGLPGPQGAVGLKGSTGPKGEMGVMGTPGLPGTPGPVGDRGLPGEKGSQ GFKGVIGPQGDPGVKGDKGEAGLPGKPGTIDMDMVSLKGQKGDQGEKGDHGAAGEKGLRG DYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGVPGQKGSVGEMGLPGTPGEKGLPG VPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGAPGEKGEPGRTGSPGLSGDKGEKGSAGI PGMPGAPGPKGSPGMAGFPGSPGRHGDKGEKGLPGLSGIPGLKGEPGEPGVPGPAGAIGQ KGEPGYDGIPGAAGAKGEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGSPGIPGLKGEP GYAGPPGPKGSQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPGLKGAKGEQG SNGWPGAPGGPGMKGDPGFQGLPGSPGLPGDIGPKGDLGPPGVPGVPGPKGTPGFPGLKG ERGDQGLPGSIGLQGPPGPPGPFQLIKGDPGLPGPVGPVGLKGFPGLPGPKGQQGVTGPS GVPGPPGSPGFDGQPGQKGEAGPYGPPGPRGFPGPPGPDGLPGAMGPPGAPSVAHGFLVT RHSQTIEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINN VCNFASRNDYSYWLSTPEPMPMNMAPITGDNIRPFISRCSVCEAPAMVIAVHSQTIQIPP CPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAY SFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT NT seq 5163 nt NT seq  +upstreamnt  +downstreamnt atgggcagatcttcctgggaaggtcggatggggctgtgtgttggggatgtttgtgctgtg cagggacagccactgcttcagggagtgatgcagcactgctctgtgtgtgctgaggaactg ctgcctgcacctgtgcagagtcttcctgcaggtcagccgtacctgaaaaagccacagtgt ttcctaagtaatgcaagatcaggcttgggagaactgaagggatgttccggttgtggaaaa tgtgattgcagtggagtaaaagggcaaaagggagaaagaggcttgccgggactacaaggt gtgattgggtttcctggaatgcaaggacctgaaggtccccctgggccaccagggcttaag ggtgatactggagaaccaggactgccaggaacaaagggaacaagaggccccccaggagta tcaggctttccaggaaacccaggccttcctggcattcctggacaagatggccctcctggt ccacctggcattccaggatgtaatggcacaaagggtgaaagaggtccagtaggtccccca ggtttaccaggactgactggaagtataggacctccaggacctcctggaatgaagggagat ccaggtgatgtgattggtcttataagtcctggtgtactaaaaggtgaaaaagggtttcct ggccaacctggactgcctggtccacctggagcttcagggtttcagggaccaatggggcca caaggccctccaggagagcaaggtcccccagggccaccaggacttccaggcgagaagggc tacatgggcttggggtttcagggtcccaaaggtgaaaagggagaacaaggggtaaggggc cccccaggacccccaggaccagcacctcatatgaaggaaaaagggagtgaaatcataaag ggagaaaagggtgatccaggcgaaaagggcgaacagggaatcccaggattgccaggttca ggtttcaaaggagacaagggtgagcctgggaagcctggtccacgtggaaagcctggaaaa gatggtgaaccaggactgaaaggagaacccggtttgcctggagggtttgggattccagga cggcctggggatcctggcaccaagggtgacaaaggggagcgaggttatccaggacctcca ggaagaatgatagatgctggaccaatagatacctttggtgaaaaaggagaccctggagtt tcaggtttgcctggactgaaaggtcaaaaaggtgaaaaaggcttccctggtgcacaagga atcccaggacctccaggtcgaccaattccagacagggtaggatcacctggtgtccctgga gagagaggtgaaaaaggtgaaaagggttctccgggattcccttcacctggaatccctgga agagatggtttcccaggtccccctgggttgcctggcccaccaggacctcctggcatagca gatgggattgatcagtgccagcagggagaacctggtgcaccaggtagtcctggacttcca ggaagagatggatttccaggagagatgggagagaaaggtgacaaaggtgaagcctgtgcc ttgtgcgataaagtaggacctcctggacttccaggaccacagggactgccaggtccagca ggttttccaggacaagcgggtttcaagggtgacagaggcttacctggacttgatggcctt ccgggggtgcctgggccccccggcgctccaggacttacgggcagccctggggcaaaagga gaacctggagattttacttatgattctatcctgaaaggcgaaaagggagatcctggtttc ccaggacagccaggtgctcctggacgagacggaagaccaggaaaagatggatttccaggt cttcagggtccaaaaggagcagcgggtacagctggcttgaaaggagaacgtggtccccct ggccagcctggattccctggagtgcgtggtgaaagaggttttcctggccctcctgggata ggtgctgcaggattacctggtgaaaaaggagacagaggctttgctggaaccccaggttta ccaggacttccaggcgcaaagggtgaagcaggacgaactatatcgctccctggacctcct ggggcagatggccttcctgggccacctggtttccctggaccccaaggtgacaaagggaat cctgggcttccgggtatacctggcctgccaggagaaaaaggtgctgttgggcagccaggt atagggtttcctggacctccaggtcccaaaggtttccaaggtcagccaggctcacctggt ctgccaggaactccaggaacccctggtctggatggtttgccaggagttccaggtttacaa ggccaaaagggtgaacctggtgtaggtctgcctggccctaagggattgccaggcccccct ggcccagctggtatccctggagaaaagggaaatccaggactgcctgggttacgtggcgag caaggctttccaggcatacctggacagcaaggattcagaggtgaccctggtctcccaggt ctccaaggcttgcagggccctccaggtgcaccggggctgggccctccaggattgccagga cctgccgggcagccgggaccccagggaccaccaggatttcctggagtaaaaggagaaagg ggcttccctggtgtcccaggtctagatatgccaggaccaaaaggggataaaggcagccca ggccagccaggagtcccaggctcggtggggttacctggcctgccaggtccacagggggct gttggactgaaaggatcaacaggacccaaaggagaaatgggagttatgggaactcctgga ttaccaggaactcctggaccagttggagatagagggttacctggtgaaaaaggtagccaa ggtttcaaaggtgtaattggaccacagggtgatcctggtgttaagggagataaaggtgaa gctggtctcccaggaaaacctggaacaatagacatggacatggttagcctcaaaggccag aagggagatcaaggagaaaaaggcgaccatggagcagcaggagaaaaagggctacgtggg gattatggagaaccaggaattccagggagagatggtgaacctggtactccaggacaacca ggaccaaaaggtgatcaaggccccccagggtacccaggggatccaggagttccaggacaa aaaggatcagtcggtgaaatgggtttgccaggaacacctggagaaaagggtcttcctgga gtacccggctcaccaggcacaccagggttccctgggcaaaaaggtgaaaaaggagacaaa ggagcaccaggttttcctggaattggctttccaggggctcctggtgagaagggagaacca gggagaacaggcagtccaggtttatctggagataagggtgaaaaaggtagtgcaggaatt cctggaatgccgggtgccccaggtcccaaaggatctcctggcatggcaggatttccagga agccctggccgtcatggagacaagggtgaaaaaggacttcctggcttaagtgggattcca ggtttaaaaggagaaccaggtgaacctggtgttccgggtcctgctggtgccattggccag aagggtgaaccaggttatgatgggattccaggtgcagctggtgcaaagggtgaacaaggt cttccaggtagaggacttccaggatttcctggtgcaaagggagataaaggtgcaaaaggt gaagtgggttttcccggatccccaggaagcccagggatcccaggcctgaaaggggagcca ggatatgcaggtccaccgggccctaaggggagccaaggtcttcctgggctaccgggaagt gcaattgaaggccctaaaggagacagagggccccaaggccaacctggtcttccaggttta ccgggtccaacagggccaccaggacctccaggtctgaaaggggccaaaggagagcaaggg agcaatggctggccaggggctcctgggggtccgggaatgaaaggtgatccaggtttccaa ggactgccaggtagtcctggtttgccaggagatatcggtccaaagggtgatcttggacct ccaggagttccaggtgttccaggtccaaaaggaactcctggcttcccaggccttaagggt gagcgaggtgaccaaggtcttcctggatctataggtttacaaggcccaccaggcccacca ggtcctttccagcttattaaaggggatcctggcttacctggacctgtaggaccagttggt ctcaagggattcccaggacttcctggtcccaaaggacaacaaggggtaacaggaccttca ggtgtacctggaccacctggtagtcccggctttgatggtcaacctgggcagaaaggagaa gctggtccttatggtcccccagggcccagaggattcccgggtccacctggccctgatggc ttgcccggggctatgggccccccaggggcaccatctgttgctcatggcttccttgtcacc agacacagtcaaaccatcgaagagccatcctgtccatttgggacaaggctgatttaccac ggctactccttgctttatgtacaaggcaatgaaagagcgcacggccaagacctgggcaca gcaggaagctgtcttcgtaaatttagtaccatgcctttcttattctgcaatatcaacaac gtctgtaattttgcatcaaggaatgactactcctactggctgtctactcctgaacccatg ccaatgaatatggctcctatcactggtgataacatcagaccattcatcagcagatgctct gtatgtgaagctcctgctatggtaatagctgttcacagtcaaacaattcaaataccaccg tgtccggagggctggagttcactttggattggttactcctttgtcatgcacaccagcgct ggtgcggagggctctggccaggccctggcgtcccctggttcctgcctagaggagttccgc agcgctcccttcattgagtgccatggccggggcacctgcaattattatgcaaatgcttac agcttctggcttgccactatagaaaggaatgagatgttcaagaaaccaactccctcaact ttgaaagccggggatctacgctcaaatgttagccgttgtcaagtctgtatgagaaaaaca taa

DBGET integrated database retrieval system