Cyanistes caeruleus (blue tit): 111945127
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Entry
111945127 CDS
T05602
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccae01002
]
111945127 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111945127 (USP4)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111945127 (USP4)
Peptidases and inhibitors [BR:
ccae01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111945127 (USP4)
Ubiquitin system [BR:
ccae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111945127 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
111945127
NCBI-ProteinID:
XP_023803572
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MFGAGDPNLFPGPVDNAGLFPGPIDNSGLFVDPETQSLKEHLIDELDYVLVPTEAWNKLV
AWYGCIDGQQPIVRKVVEYGLFVKHYKVEVYLLELKLCESSDPDNVISCHFSKADTVATI
EKEMRKLFNIPAEKETRLWNRYMSNTYEQLSKLDSTVQDAGLYQGQVVLIEVKNEDGTWP
GQHCLAKGSGFVCNSYNCRDSASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLE
DKYEAEINQNNPLGMRGEIAEAYADLIKQMWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQ
DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFH
GLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQRRPVQYRVVVPMM
GAISDLCESLSKLSGVPAENMVVTDVYNHRFHKIFQMDEGLNHIMPKDDIFVYEVCKPTD
DGSEYVTLSVYFREKTMRQSSNTSGTVLFGQPLLISVPKHKLTVDHLYSVILEQISRCVK
LPLAEEYSPPCPDRGTYNGSNGVVEGDIEEMEHQDGGEEGKEKLTEVDPCHSEGCMQVES
ARDPPPCKKQHFTFSLVNSSGTSEINSIVEGKILKLSAFSAVAIDWDSETRRLLYDEQEA
QAFEKHGSMLQPQKKKSVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSL
PRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAM
GVGHYAAYAKNKVNDKWYYFDDSSVSVASEDQIVTKAAYVLFYQRRNSEEHSAPSAPPEE
CDGMDTN
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgccggcgaccccaaccttttcccgggccccgtcgacaacgcgggcctgttc
ccggggcccatcgacaactcgggcctgtttgtcgatccagaaactcagagtttaaaggaa
cacctcattgatgagctggattacgtgctggtgcccaccgaagcctggaacaaactagta
gcgtggtatggctgcatagacgggcagcagcctattgtgaggaaagtggtggagtacggg
ctgtttgtgaagcactataaggttgaggtttatctcctggagctgaagctgtgcgagagc
agtgatcccgacaatgtcatcagctgccacttcagcaaggcagatactgttgctaccatc
gagaaagaaatgagaaaactattcaatatcccagctgagaaggaaaccaggctatggaac
aggtatatgagtaacacttatgagcagctcagcaagctggatagcacagtgcaagatgca
gggctctatcagggacaggttgttttaatagaagtaaaaaatgaagatggcacgtggcct
ggacagcattgcctggcaaaaggttctgggtttgtctgtaactcttacaactgcagggac
agtgcttccctgtcacagcctggactctgtggactcagtaaccttggaaacacctgcttc
atgaattctgcattacagtgcctgagcaatactcctcctttgactgattacttcctggaa
gataaatatgaagctgaaataaatcagaacaacccactggggatgaggggagaaattgca
gaagcctatgcagatctcattaagcagatgtggtctgggaggcagtctcacgtggcccca
cgtatgtttaaaacacaggttgggcgatttgctcctcagttttcaggataccagcagcag
gattcccaggagctcctggcttttcttctagatggcttgcatgaggatttgaacagagtg
aagaagaagccctacttggagctgaaggatgccaatggccgacctgattcggaggtggca
aaagaggcatgggagaatcataggctgaggaatgattccatcattgtggatatttttcat
ggtcttttcaagtctactcttgtttgtcccaaatgctctaaagtttctgtgacctttgat
cccttctgttacttaactctcccactgcccttgaggagggatcgtctcatggaagttacc
ctggtatatgcagacccacagcgcagacctgtccagtaccgggttgtggtgccaatgatg
ggggccatctcggatctgtgtgaatcactttccaaactctctggtgttcctgcagaaaat
atggtggtgacagacgtgtataatcaccgattccacaaaatcttccaaatggatgaaggt
ttaaatcatatcatgccaaaagacgacatctttgtgtatgaagtttgcaagccaactgat
gatggctcagagtatgttactctctctgtttactttcgggaaaagacaatgaggcaatcc
agcaacacttcagggactgtgctctttgggcagccactattaatatctgtgcccaaacac
aagctcactgtggatcacctgtacagtgtgattttggagcagatcagccgctgtgtgaaa
ctccctctggcagaagaatactccccaccctgccccgacagaggaacctacaatggctcc
aatggtgtggttgaaggagacattgaggagatggaacatcaggatgggggagaggagggc
aaggaaaagctgacagaagttgatccctgccactctgagggttgtatgcaagtggagtca
gcaagagacccgccgccttgcaagaaacagcatttcacttttagccttgtgaattcctct
gggacctcagagataaactccattgttgaaggaaaaattttaaaactgagtgctttttct
gcagttgctattgactgggattctgagacacggaggctactttatgatgaacaggaggca
caggcatttgaaaaacatggaagcatgctacaaccacagaagaagaagtctgtagtagcc
ctcagagattgcatagagctctttactactatggaaacacttggtgaacatgacccgtgg
tactgccctaactgtaagaaacatcaacaggccacgaagaagtttgacctgtggtctttg
cccaggattttggtggtacatctaaaacgcttctcatacagcagatattggagggataaa
cttgacactgttgtggaattccccatcaggggtttgaacatgtccgagtttgtctgcgac
ccaagagcaggctcatatgtgtatgacctcattgcagtttccaatcactatggagccatg
ggagtgggccactacgctgcctatgcgaagaacaaggtgaacgacaagtggtactacttt
gacgacagcagtgtctcagtggcttcagaagaccaaatagtgacaaaagccgcgtatgtg
cttttctatcagcgccgaaacagcgaggaacattctgccccctctgctcccccagaagag
tgtgatggcatggacaccaactaa
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