Clavibacter californiensis: FGD68_00155
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Entry
FGD68_00155 CDS
T08592
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FGD68_00155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaf03021
]
FGD68_00155
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_00155
Enzymes [BR:
ccaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FGD68_00155
Transcription machinery [BR:
ccaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FGD68_00155
DNA repair and recombination proteins [BR:
ccaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FGD68_00155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
UKF80112
LinkDB
All DBs
Position
complement(32706..33701)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNEKAKFELELTIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLTELFGLARELNSAAEGIEIGPAPVD
AVLSSELSMPIEDLDLSVRSYNCLKREGINNVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDAVPGFDGAHYYSYDEDETTTN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcgcagcgccccaccctcaccgaggagtccatctcggagttccgctcgcgg
ttcgtcatcgagccgctcgaacccggcttcggctacacgctcggcaactcgctccgccgc
acgctcctctcgtccatccccggcgcggccgtcaccagcatccggatcgacggcgtgctg
cacgagttcagcaccgtccccggcgtgaaggaggacgtgaccgagatcatcctcaacatc
aagggcctcgtcgtctccagcgagcacgacgagccgatcaccgcgtacctgcgcaagcag
ggtgcgggccaggtcacggccgccgacatctcggctccggccggcgtcgagatccacaac
cccgagctcgtcatcgccacgctcaacgagaaggcgaagttcgagctggagctgacgatc
gagcgcggccgcggctacgtctcggcgacccagaaccgcagcgagttcagcgaggcgggc
cagatcccggtcgactcgatctactcgcccgtgctcaaggtcacctaccgcgtcgaggcc
acccgtgccggcgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagaccaagtcg
gccatcacgccgcgcgacgcgatcgcgtccgccggccgcacgctcaccgagctgttcggc
ctggcacgcgagctcaactcggccgcagagggcatcgagatcggccccgcgccggtcgac
gccgtcctcagctccgagctgtcgatgcccatcgaggacctcgacctctcggtgcggtcg
tacaactgcctcaagcgcgagggcatcaacaacgtcagcgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcaaggacaag
ctggtcgagctcggtctgtcgctgaaggacgccgtccccggcttcgacggcgcgcactac
tacagctacgacgaggacgagaccaccaccaactga
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