Clavibacter californiensis: FGD68_03680
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Entry
FGD68_03680 CDS
T08592
Name
(GenBank) glycosyl hydrolase-related protein
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
FGD68_03680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaf04131
]
FGD68_03680
Enzymes [BR:
ccaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
FGD68_03680
Membrane trafficking [BR:
ccaf04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
FGD68_03680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Ams1-like_1st
Glyco_hydro_57
SCAN
Rhamnogal_lyase
Motif
Other DBs
NCBI-ProteinID:
UKF80763
LinkDB
All DBs
Position
complement(703696..706881)
Genome browser
AA seq
1061 aa
AA seq
DB search
MHQNQKLVQERILRALDERITPAVYSAKTPVTLRAWMAPDEPVPVAEAMRQEYAPFALGE
PWGRAWSTWWFEVTGEVPAEWAGRTVELLIDPGFIGDWPGNQAECLVHTMDGVPVKGIHP
RNTYVRLADEAAGGEQVRFLVEAAGNPDILVNEFVPTPYGDKATAPAEPIYRFRQAELAV
FEPEVWALRFDVEVLYQLLMELPETEPRRHEVLRAIERALDVLAMDDIVGTAAAARAELA
DVLSRPAVPSAHTLSGVGHAHIDSAWLWPIRETKRKTARTFSNVLRLAEQYPDFRFACSQ
AQQYVWVKENYPTVFEGIKEAIAAGTWYPVGSMWIEPDGNLPGGEAMIRQLTHGMRFFQE
ELGVETHGMWLPDSFGYTASFPQIAKLAGLDWFLTQKLSWNQTNTFPHHTFFWEGIDGSR
IFTHFPPIDTYNSTLEAEETHHAVRQFREKGRATMSLAPFGYGDGGGGPTRDMMERQRRT
ADLEGSPKVIVEHPDEFFRKAEAEYPDAPVWVGELYLELHRGTFTSHAREKRGNRQAEHR
LREAELWWTIATVRTGADYPYQALDRLWKQTLLQQFHDILPGSSITWVHRENEEDYARSL
AELDALVADAIARVTAQAVADGEGDGSGAFAVNSTGHARTALVEAADGSALALVAVPGSG
IAPLVAVEPVSPVATTRADGGTVLDNGLLRVTLDARGLITSIVDLRHADRELVPAGRAAN
LLQLHEDIPTAWDAWDVDAHYRASRTDLVEAASVELVEDSELRATVEVVRQFGRSRVVQR
VSLHADDARIHATAELDWLEDEKLLKVTFPLTIHAQHHSAEIQFGHVRRPTHTNTSWDEA
RFEVMAHRFVHVEEPGYGVALTNAGSYGHDITRSVGATGEVETELRISLVRAARSPDPVQ
DIGHHRFEYALVPGVGIEGAVDAGLEQNLPVRVVRPGETAEAAPAAVGSAPASAEVVPSS
LPTAAGLVSVHGGTVRIEALKLADDGSGDVIVRLYESTGARAATRLEAHLAADRFTEVDV
LERPLGAGFPRSIAFDPEADGRGVRLVLRAFQVITVRIHRT
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagaaccagaagctcgtccaggagcggatcctccgcgcgctcgacgagcggatc
acccccgccgtgtactcggcgaagacgcccgtgacgctccgcgcgtggatggcgcccgac
gagcccgtgcccgtcgccgaggcgatgcggcaggagtacgcgcccttcgcgctcggcgag
ccgtggggccgcgcctggtccacgtggtggttcgaggtgaccggcgaggtccccgccgag
tgggccggccgcacggtcgagctgctcatcgaccccgggttcatcggcgactggccgggc
aaccaggccgagtgcctcgtgcacacgatggacggggtgcctgtcaaggggatccacccg
cgcaacacctacgtgcgcctcgccgacgaggccgcgggcggcgagcaggtgcgcttcctc
gtggaggcggccggcaacccggacatcctggtgaacgagttcgtgccgaccccgtacggc
gacaaggccaccgcgcccgccgagcccatctaccgcttccgccaggccgagctcgccgtg
ttcgagcccgaggtgtgggcgctccgcttcgacgtcgaggtgctgtaccagctgctgatg
gagctgcccgagaccgagccccgccgccacgaggtgctccgcgccatcgagcgcgcgctc
gacgtgctcgcgatggacgacatcgtcggcaccgcggccgccgcccgcgccgagctcgcc
gacgtgctctcgcgtcccgccgtcccgagcgcgcacacgctgagcggcgtcggccacgcc
cacatcgacagcgcctggctctggcccatccgcgagaccaagcgcaagaccgcgcgcacc
ttctccaacgtgctccggctcgccgagcagtaccccgacttccgcttcgcgtgctcgcag
gcgcagcagtacgtctgggtgaaggagaactacccgacggtgttcgaggggatcaaggag
gccatcgccgcgggcacctggtacccggtcggatccatgtggatcgagcccgacggcaac
ctgccgggcggcgaggcgatgatccgccagctcacccacggcatgcgcttcttccaggag
gagctcggcgtcgagacccacggcatgtggctgcccgactcgttcggctacacggcgtcg
ttcccgcagatcgcgaagctggcgggcctcgactggttcctcacgcagaagctctcctgg
aaccagaccaacacgttcccgcaccacaccttcttctgggagggcatcgacgggtcgcgg
atcttcacgcacttcccgcccatcgacacctacaactccacgctcgaggcggaggagacg
caccacgccgtccggcagttccgcgagaagggccgcgcgaccatgtcgctcgcgcccttc
ggctacggcgacggcgggggcgggcccacgcgcgacatgatggagcgccagcgccgcacg
gccgacctcgaggggtcgccgaaggtcatcgtggagcacccggacgagttcttccgcaag
gccgaggccgagtacccggacgcgcccgtctgggtcggcgagctgtacctcgagctgcac
cgcggcacgttcacgtcgcacgcccgcgagaagcgcggcaaccgccaggccgagcaccgc
ctgcgcgaggccgagctgtggtggaccatcgcgaccgtccgcacgggcgccgactacccg
taccaggcgctcgaccggctctggaagcagacgctgctgcagcagttccacgacatcctc
cccggctcctccatcacctgggtgcaccgggagaacgaggaggactacgcccgcagcctc
gccgagctcgacgcgctcgtggccgacgccatcgcgcgggtcacggcgcaggcggtcgcg
gacggcgagggcgacggatccggcgcgttcgcggtgaactcgaccggccacgcgcgcacg
gcgctcgtggaggcggccgacggatccgcgctcgcgctcgtcgcggtgccgggcagcggg
atcgcgccgctcgtcgcggtggagcccgtctcgccggtcgccacgacgcgcgccgacggc
ggcaccgtcctcgacaacgggctgctgcgcgtcacgctcgacgctcgcggcctcatcacc
tcgatcgtcgacctgcggcacgccgaccgcgagctcgtgcccgccggccgcgccgcgaac
ctgctccagctccacgaggacatccccacggcgtgggacgcctgggacgtggacgcgcac
taccgcgcgagccgcaccgatctcgtcgaggcggcgtcggtcgagctcgtcgaggactcg
gagctccgcgcgaccgtcgaggtggtccgccagttcgggcgctcgcgcgtcgtgcagcgg
gtgtcgctgcacgccgacgacgcgcggatccacgccacggccgaactcgactggctcgag
gacgagaagctcctcaaggtgaccttcccgctcacgatccacgcgcagcaccacagcgcg
gagatccagttcgggcacgtccgccggcccacgcacacgaacacgtcgtgggacgaggcg
cgcttcgaggtcatggcgcaccgcttcgtgcacgtcgaggagcccggctacggcgtcgcg
ctcaccaacgcgggcagctacgggcacgacatcacgcgctcggtcggcgcgacgggcgag
gtcgagacggagctgcggatcagcctggtccgggcggcccgctcccccgacccggtgcag
gacatcggccaccaccggttcgagtacgcgctcgtgccgggcgtcggcatcgagggcgcg
gtggacgccgggctcgagcagaacctgcccgtgcgcgtcgtgcggcccggtgagacggcc
gaggcggcgccggccgcggtcggatccgcgcccgcgtccgccgaggtcgtcccgtcctcg
ttgcccaccgccgctggcctcgtctccgtgcacggcggcacggtccggatcgaggcgctc
aagctcgcggacgacggctcgggcgacgtgatcgtgcggctctacgagtccacgggcgcg
cgcgccgccacccggctcgaggcgcacctcgccgccgaccgcttcaccgaggtcgacgtg
ctggagcgcccgctcggcgcgggcttcccgcgttcgatcgcgttcgatcccgaggccgac
ggccgcggcgtgcggctcgtgctgcgggcgttccaggtgatcacggtgcggatccaccgg
acctga
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