Clavibacter californiensis: FGD68_04785
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Entry
FGD68_04785 CDS
T08592
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ccaf
Clavibacter californiensis
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_04785
Enzymes [BR:
ccaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FGD68_04785
DNA repair and recombination proteins [BR:
ccaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FGD68_04785
Prokaryotic type
FGD68_04785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UKF80969
LinkDB
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Position
complement(955829..957355)
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AA seq
508 aa
AA seq
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MSDDDAPDHGSTDREGAEEAHGPSIVWLRDDLRVADNPALHAAVERGEPVVVLYVLDEES
DGIRPLGGAARWWLHMSLSRLGESLRELGSPLVLRRGKAADVVDALVREVGAGAVLWNRR
YGGAEIAVDTGIKKDLGDRGLDVRSFQGSLLVEPWTVTNKQGEPFRVYTPFWKAAQEREE
PRKPLPAPKELDALRQAPRSDDLDGWGLLPTKPDWAAGLREACDPGEAAGLQRLEDFVHH
ELEDYAAQRDEPAATTTSRLSAYLRWGEVSPFQVWHRIQRTRGRKVGGDEVNATKFLSEL
GWREFSYHLLYHQPDLATRNFVPRFDAFPWDEPTDETLGAWQRGETGVPLVDAGMRALWK
DGHLHNRVRMVVASFLIKNLLIDWRHGEQWFWDTLVDADAANNAASWQWVAGSGADAAPY
FRVFNPVLQGQKFDPSGEYIRSYVPELAHAPRDVVHEPWKATGDLVASAEDGAEDSADGG
LAAYPAPIVDLKESRQRALAAYDEIKDR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgacgcccccgaccacggatccacggacagggagggcgccgaggaggcg
cacggccccagcatcgtctggctgcgcgacgacctccgcgtggccgacaatcccgcgctg
cacgcggcggtcgagcggggcgagcccgtcgtcgtgctctacgtgctcgacgaggagagc
gacgggatccggccgctcggcggcgccgcgcgctggtggctgcacatgagcctgtcgcgc
ctcggggagtcgctgcgggagctcggctcgccgctcgtgctgcgccgggggaaggccgcc
gacgtcgtcgacgcgctcgtgcgcgaggtcggcgccggcgcggtgctgtggaaccggcgc
tacgggggcgcggagatcgcggtcgacaccggcatcaagaaggacctcggcgaccggggt
ctcgacgtccgcagcttccagggatcgctgctcgtcgagccgtggacggtgacgaacaag
cagggcgagccgttccgcgtgtacaccccgttctggaaggccgcgcaggagcgggaggag
ccgcggaagccgctgcccgcgccgaaggagctcgacgcgctgcgacaggcaccccgctcg
gacgacctcgacggctggggcctgctgccgacgaagcccgactgggcggccggcctccgc
gaggcgtgcgatcccggcgaggcggccggcctccagcgcctcgaggacttcgtccaccac
gagctcgaggactacgccgctcagcgtgacgagcccgcggcgacgaccacgtcgcggctg
tcggcgtacctgcgctggggcgaggtgagcccgttccaggtgtggcaccggatccagcgc
acgcgcggcaggaaggtgggcggggacgaggtcaacgccaccaagttcctctccgagctg
ggctggcgcgagttcagctaccacctgctctaccaccagccggatctcgccacccgcaac
ttcgtgccgcgcttcgatgcgttcccgtgggacgaaccgaccgatgagaccctcggcgcg
tggcagcggggcgagacgggggtgccgctcgtcgacgcgggcatgcgcgcgctctggaag
gacgggcacctgcacaaccgcgtgcggatggtcgtggcctcgttcctcatcaagaacctg
ctgatcgactggcgccacggcgagcagtggttctgggacacgctcgtcgacgcggacgcc
gcgaacaacgcggcgagctggcagtgggtcgcgggatccggcgccgacgccgccccctac
ttccgcgtcttcaacccggtgctgcaggggcagaagttcgacccgtcgggcgagtacatc
cgctcgtacgtgcccgagctggcgcacgcaccgcgggacgtggtgcacgagccgtggaag
gcgacgggcgacctcgtcgcgagcgcggaggacggcgcggaggactcggctgacggcggg
ctcgcggcgtacccggcgccgatcgtcgacctgaaggagtcccggcagcgggccctggcg
gcctacgacgagatcaaggaccggtga
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