Clavibacter californiensis: FGD68_06335
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Entry
FGD68_06335 CDS
T08592
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FGD68_06335 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccaf01007
]
FGD68_06335 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaf03016
]
FGD68_06335 (lysS)
Enzymes [BR:
ccaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FGD68_06335 (lysS)
Amino acid related enzymes [BR:
ccaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FGD68_06335 (lysS)
Transfer RNA biogenesis [BR:
ccaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FGD68_06335 (lysS)
Prokaryotic type
Other AARSs
FGD68_06335 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TOBE_3
Motif
Other DBs
NCBI-ProteinID:
UKF81264
LinkDB
All DBs
Position
1267012..1268553
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AA seq
513 aa
AA seq
DB search
MTDSPGTPASPETAPAPAVEGSAEDVAEQKAVRLAKRARLNAQGGPGEGAYPVQVPVTTT
IPAVRAEYGHLEPGQETDHVVGIAGRVVHFRNTGKLCFATLQAGDGTRIQAMISLAEVGE
EALAAWKELVDLGDHVFVAGRVIASRKGELSIMATEWRIASKALLPLPNLHSELSDETRV
RSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPMLQVMHGGASARPFVTHS
NAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDY
TSIAELTQTLVQDAAMAVAGSHVVTWADGTEYDLGGEWDRISMYGSLSEAAGVDITPATT
VDELQAIADREGVVVPLSTHGKLVEELWEHFVKGGLERPTFVLDFPVETSPLTRAHRSIE
GVVEKWDLYIRGFELATGYSELVDPVVQRERFVDQARQSARGDDEAMPLDEEFLRALEHG
MPPSGGMGMGVDRLLMAITGLGIRETILFPLVK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagccccggaacgcccgcgtcgcccgagaccgcccccgctcccgccgtggag
ggatccgccgaggacgtcgccgagcagaaggccgtgcgcctcgccaagcgcgcccgcctc
aacgcccagggcggccccggcgagggcgcgtaccccgtgcaggtcccggtcaccacgacc
atccccgcggtccgcgccgagtacggccacctcgagcccggccaggagaccgaccacgtg
gtcggcatcgccggccgcgtcgtgcacttccgcaacaccggcaagctctgcttcgccacg
ctccaggcgggcgacggcacgcgcatccaggccatgatctcgctggccgaggtcggcgag
gaggcgctcgccgcgtggaaggagctcgtcgacctcggcgaccacgtcttcgtcgccggc
cgcgtcatcgcgagccgcaagggcgagctgtcgatcatggccaccgagtggcgcatcgcc
tcgaaggccctgctgcccttgccgaacctccattccgagctctcggacgagacccgcgtc
cgcagccggtacctcgacctgatcgtgcgcgaccaggcccgcaagaacgtcctcgaccgc
gcgaaggtcaacgcctccatgcgcgagacgttccgccagcgcggctacgtcgaggtcgag
acccccatgctgcaggtgatgcacggcggcgcgtccgcccgcccgttcgtcacgcactcc
aacgccttcgacaccgagatgtacctccgcatcgcgcccgagctgtacctcaagcgcgcg
gtcgtcggcggcatcgaccgcgtcttcgagatcaaccgcaacttccgcaacgagggcgcg
gactcgacgcacagccccgagttcgcgatgctcgaggcgtacgaggcctacggcgactac
acctccatcgccgagctcacgcagacgctcgtgcaggacgcggccatggccgtcgccggc
agccacgtcgtcacgtgggccgacggcaccgagtacgacctcggaggcgagtgggaccgc
atctccatgtacggctcgctgagcgaggccgcgggcgtcgacatcacgcccgccaccacc
gtcgacgagctccaggcgatcgccgaccgcgagggcgtcgtcgtgccgctgagcacgcac
ggcaagctcgtcgaggagctctgggagcacttcgtcaagggcggcctcgagcgccccacc
ttcgtcctcgacttccccgtcgagacctccccgctcacgcgcgcgcaccgctccatcgag
ggcgtcgtcgagaaatgggacctctacatccgcggcttcgagctggcgaccggctactcc
gagctcgtggatcccgtcgtgcagcgcgagcgcttcgtcgaccaggcgcgccagtcggcg
cgcggcgacgacgaggccatgccgctcgacgaggagttcctccgtgccctcgagcacggc
atgccgccctcgggcggcatgggcatgggggtcgaccggctcctcatggccatcaccggt
ctcggcatccgcgagaccatcctgttccccctagtgaagtag
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