Clavibacter californiensis: FGD68_07130
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Entry
FGD68_07130 CDS
T08592
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00521
Streptomycin biosynthesis
ccaf00523
Polyketide sugar unit biosynthesis
ccaf00541
Biosynthesis of various nucleotide sugars
ccaf01100
Metabolic pathways
ccaf01110
Biosynthesis of secondary metabolites
ccaf01250
Biosynthesis of nucleotide sugars
Module
ccaf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FGD68_07130
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FGD68_07130
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FGD68_07130
Enzymes [BR:
ccaf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FGD68_07130
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
UKF81415
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Position
1447285..1447890
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AA seq
201 aa
AA seq
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MQIRELAVPDAYELTPVQRADDRGVFLEWYRFDEIQERVGHPLDLRQANMSVSKRGVVRG
VHFADVPRGQAKHVKAVSGAVLDFIVDIRVGSPTFGQWDSVRLDTETHKAVYISEGLGHC
FVALTDDAAVTYLVSDVYNPSAEHGINPLDPGIGLVFPEEAGETLLSPKDLDAPTLAEAA
AAGLLPTWSDMRAFHDSQKVS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatccgcgaactcgccgtacccgacgcgtacgagctcacccccgtccagcgcgct
gacgaccggggcgtgttcctcgagtggtaccggttcgacgagatccaggagcgcgtcggc
cacccgctcgacctccgccaggccaacatgagcgtctcgaagcgcggcgtcgtccgcggc
gtgcacttcgccgacgtgccgcgcggccaggccaagcacgtgaaggccgtctccggcgcc
gtgctcgacttcatcgtggacatccgcgtcggatccccgacgttcgggcagtgggacagc
gtgcggctcgacaccgagacgcacaaggccgtctacatctccgagggcctcggccactgc
ttcgtcgcgctcaccgacgacgcggccgtcacgtacctcgtgagcgacgtgtacaacccc
tcggccgagcacggcatcaaccccctcgaccccgggatcggcctcgtcttcccggaggag
gccggtgagacgctgctctccccgaaggacctcgacgccccgacgctcgccgaggcggcg
gccgccggactcctccccacctggtcggacatgcgcgccttccacgactcgcagaaggtg
agctga
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