Clavibacter californiensis: FGD68_08470
Help
Entry
FGD68_08470 CDS
T08592
Name
(GenBank) glycosyl hydrolase-related protein
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
FGD68_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaf04131
]
FGD68_08470
Enzymes [BR:
ccaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
FGD68_08470
Membrane trafficking [BR:
ccaf04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
FGD68_08470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Ams1-like_1st
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
UKF78845
LinkDB
All DBs
Position
complement(1740686..1743712)
Genome browser
AA seq
1008 aa
AA seq
DB search
MPPTTALAEARVERFVRDRLVPNVHRRRMPLAIEAWDAPGEPVPFAEAVRQDYRPFAVGT
PWSRAWGTTWFHITGTVPDDGAADGTALEVIVDLGFSDRQPGFQAEGLVHRPDGSVVKAI
EPYNGYVPLEAIGAGTAPGTRIDLWIEAASNPDIGGDSFHGETPLGDPATAGDDSIYRLR
TMDLAWRDEAVWELDRDVWTLQGLMGQLDPASSRRAEILAALERMCDAVDPDDVAGTAPA
GRRALEAVLAAPAHASAHRVTAVGHAHIDSAWLWPVRETRRKVARTFSNVLALMDEDPDF
VFAASSAQQYAWLKEDHPELFERLRQRVAEGRFVPVGGMWVESDTNMPGGEALVRQLVHG
KRFFLEEFGIDAREVWLPDSFGYTGALPQIVRGAGAEYFFTQKQSWNETNTMPHHTFLWE
GIDGSRVFTHFPPVDSYNSDLSGEDLARAERQHAEKAVSNASIVPFGWGDGGGGPTREMT
AAAHRTRDLEGSPRVTLGTPLAFFDAAKAEIRDPHVWSGEMYLEFHRGTYTSQARTKQGN
RRSEHLLREAELWLATAAVRDLGEYPHDELDALWRTVLLLQFHDILPGTSIAWVHQEAER
EHARVQGRLRELVADAQSALAGTGDRRIAFNAAPVDADGVGALSAGVVDPAPASPAPVAD
GDGWVIDNGLVRARVDADGTVSSLVDAASGRDLVAPGQRLGLLQLFRDTPNQWDAWDIDD
AYRRNRTDLTEVADVRIDGAALVVERAFGASRVTQTWTLPAGEPELQVVTDVDWHERQKL
LKLAFPLDVHADRAASEVQFGHVQRVTHANTSWETARFETVAHRWVHVGEPGFGVAVAND
ATYGHDVTRIPRPDGGSATLVRQSLLRAPVFPDPHADQGRHVLRSAVRVAPDVLDAADAG
YRLNLPVREVRGDHRVDPLVASSNAAVVIEAVKLAEDRSGDLVVRLYEARGGRERTVVRV
DPAAGLGDALRTDLVERPLEGAVPEPSADGVELTLRPFEIATLRFARG
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaccaccgcgctcgccgaggcccgcgtcgagcggttcgtccgcgaccgcctc
gtgccgaacgtccaccgccgacggatgccgctcgcgatcgaggcgtgggacgcgccgggc
gaacccgtgccgttcgccgaggcggtgcggcaggactaccggccgttcgccgtcggcacg
ccgtggagcagggcatggggcacgacgtggttccacatcaccggcaccgtgccggacgac
ggggccgcggacggcaccgcgctcgaggtgatcgtcgacctcggcttcagcgaccggcag
cccggtttccaggccgagggcctcgtccaccggcccgacggcagcgtcgtgaaggccatc
gagccgtacaacggctacgtgccgctcgaagcgatcggtgccggcaccgcgccggggacg
cgcatcgacctctggatcgaggcggcgtcgaaccccgacatcggcggcgactccttccac
ggcgagacgccgctcggcgaccccgccaccgcgggcgacgactccatctaccggctgcgc
acgatggacctcgcgtggcgcgacgaggccgtctgggagctcgaccgcgacgtgtggacg
ctgcaggggctcatgggccagctggatccggcgtcgtcgcggcgcgcggagatcctcgcc
gccctcgagcgcatgtgcgacgcggtggatccggacgacgtcgccggcaccgcccccgcc
ggccggagggcgctcgaggccgtgctggccgcgcccgcccacgcgagcgcgcaccgcgtc
acggcggtcggacacgcgcacatcgactcggcctggctctggcccgtgcgcgagacccga
cgcaaggtcgcccgcaccttctcgaacgtgctcgcgctcatggacgaggatcccgacttc
gtgttcgccgcctccagcgcgcagcagtacgcgtggctgaaggaggaccatcccgagctg
ttcgagcggctgcggcagcgcgtggccgagggccggttcgtccccgtcggcgggatgtgg
gtcgagtcggacacgaacatgccgggcggcgaggccctggtccgccagctcgtgcacggc
aagcggttcttcctcgaggagttcgggatcgacgcccgcgaggtgtggctgcccgactcg
ttcggctacacgggcgcgctgccgcagatcgtgcgcggtgccggcgccgagtacttcttc
acgcagaagcagtcgtggaacgagacgaacacgatgccgcaccacaccttcctctgggag
ggcatcgacggcagccgcgtcttcacgcacttcccgccggtggactcctacaactccgac
ctctccggggaggacctcgcgcgcgccgagcggcagcacgccgagaaggccgtgagcaac
gcgtccatcgtcccgttcggctggggcgacggcggcggcgggccgacccgcgagatgacg
gcggcggcgcaccgcacgcgcgatctcgaggggtcgccgcgcgtgacgctcggcacgccg
ctcgcgttcttcgacgccgcgaaggccgagatccgggacccgcacgtgtggtcgggagag
atgtacctcgagttccaccgcggcacgtacacatcgcaggcgcgcacgaagcagggcaac
cggcgcagcgagcacctgctgcgtgaggcggagctgtggctcgcgaccgccgcggtccgc
gacctcggcgagtacccgcacgacgagctcgacgccctgtggcgcacggtgctgctgctg
cagttccacgacatcctgcccggcacctccatcgcctgggtgcaccaggaggccgagcgc
gagcacgcccgcgtgcagggccgcctgcgcgagctcgtcgcggacgcgcagtccgcgctc
gcgggaaccggcgaccggcgcatcgcgttcaacgcggcacctgtggacgcggacggcgtc
ggcgcgctgtcggccggggtcgtggatcccgcgcccgcctcccccgcgcccgtcgcggac
ggcgacggctgggtcatcgacaacggactcgtccgggcgcgcgtcgacgcggacggcacc
gtctcgtcgctcgtcgacgcggcgtccggccgcgacctcgtcgcccccggccagcgcctc
ggcctcctgcagctgttccgcgacaccccgaaccagtgggacgcgtgggacatcgacgac
gcctaccgccgcaaccgcaccgacctcaccgaggtggcggacgtgcggatcgacggcgcg
gccctcgtggtcgagcgcgcgttcggcgcctcgcgcgtcacccagacctggacgctcccg
gcgggcgaacccgagctgcaggtggtcaccgacgtcgactggcacgagcggcagaagctc
ctcaagctcgcgttcccgctcgacgtgcacgccgaccgcgccgcgtccgaggtccagttc
ggccacgtgcagcgggtgacgcacgcgaacacgtcgtgggagaccgcgcgcttcgagacg
gtggcgcaccgctgggtgcacgtgggcgagccgggcttcggggtcgcggtcgcgaacgac
gcgacgtacgggcacgacgtgacgcggatcccccgccccgacggcggcagcgcgaccctc
gtgcgccagtcgctgctccgggcgcccgtgttccccgacccgcacgcggaccagggccgt
cacgttctgcgctccgcggtccgggtcgcgccggatgtgctcgacgccgccgacgcgggc
taccggctcaacctgccggtgcgcgaggtccgtggcgaccaccgcgtcgacccgctcgtc
gcctcgtcgaacgcggccgtcgtgatcgaggccgtcaagctcgccgaggaccgctcgggc
gacctcgtcgtgcggctctacgaggcgcgcggcggccgcgagcgcacggtcgtgcgggtg
gatccggccgccggcctcggcgacgccctccgcacggacctcgtggagcggcccctcgag
ggcgccgtcccggagccgtccgccgacggggtcgagctgaccctgaggccgttcgagatc
gcgacgctgcggttcgcccgcggctag
DBGET
integrated database retrieval system
