Clavibacter californiensis: FGD68_09190
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Entry
FGD68_09190 CDS
T08592
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf02024
Quorum sensing
ccaf03060
Protein export
ccaf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FGD68_09190 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FGD68_09190 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FGD68_09190 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccaf02044
]
FGD68_09190 (ffh)
Enzymes [BR:
ccaf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FGD68_09190 (ffh)
Secretion system [BR:
ccaf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FGD68_09190 (ffh)
Eukaryotic Sec-SRP protein
FGD68_09190 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
AAA_24
Zeta_toxin
nSTAND3
MMR_HSR1
AAA_31
APS_kinase
ArsA_ATPase
AAA_18
AAA_33
nSTAND_NTPase7
TsaE
AAA_16
6PF2K
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UKF78982
LinkDB
All DBs
Position
1882303..1883874
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AA seq
523 aa
AA seq
DB search
MATFGTLSDRLAETFKNLRGKGKLSAADVDGTVREIRRALLEADVALDVVKAFTASVRER
ALGGEVSQALNPAQQVVQIVNEELVGILGGQQRRIQFAKRPPTVIMLAGLQGAGKTTLAG
KLGKWLAKDGHTPMLVAADLQRPNAVQQLQVVGEQAGVPVFAPEPGNGRGNPVRVAKDAM
KHAVDKQYSVVIIDTAGRLGVDAELMKQAADIRKATDPDEVLFVIDAMIGQDAVATAKAF
QDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMFASTGEGLDDFEPFHPDRMASRILD
LGDILTLIEQAQQAFDEEEAMEVAQKLASDTFTLDDFLKQMQQLRGKGSLKKMMGMLPGM
GAMKEQLENFDEKEIVRTEAIIQSMTKAERQNPKLLNGSRRLRIARGSGMTVTDVNGLVQ
RFEQASKMMRTVARGGMPQIPGMGPMPGAHSSRKPVQQKKKGSKSGNPAKRAQENAALAS
GQRIGGPTAPAGSGFGLAGAAKGGADGAPSEEELASLQKFLGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggaacactctcggaccgcctcgccgagaccttcaagaacctgcgcggc
aagggcaagctgagcgccgcggacgtcgacggcaccgtccgcgagatccgccgtgcgctg
ctcgaggccgacgtcgcgctcgacgtcgtcaaggcgttcaccgcgtccgtccgcgagcgc
gccctcggcggcgaggtcagccaggcgctgaacccagcccagcaggtcgtgcagatcgtc
aacgaggagctcgtcggcatcctcggcggccagcagcggcggatccagttcgccaagagg
ccgccgaccgtcatcatgctcgcgggcctccagggcgcgggcaagacgaccctcgcgggc
aagctcggcaagtggctcgcgaaggacggccacactccgatgctcgtcgcggccgacctc
cagcgccccaacgccgtgcagcagctgcaggtcgtcggcgagcaggccggcgtccccgtc
ttcgcgcccgagcccggcaacggccgcggcaaccccgtgcgcgtcgccaaggacgcgatg
aagcacgcggtcgacaagcagtacagcgtcgtcatcatcgacaccgcgggccgcctcggc
gtcgacgcggagctgatgaagcaggccgcggacatccgcaaggccaccgaccccgacgag
gtcctcttcgtcatcgacgccatgatcggccaggacgcggtcgctaccgcgaaggcgttc
caggacggcgtcgacttcacgggcgtcgtgctctccaagctcgacggcgacgcgcgcgga
ggagcggccctctcggtcgcctccgtcacgggccgcccgatcatgttcgcgtccaccggc
gagggcctcgacgacttcgagcccttccaccccgaccgcatggcgagccgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcg
atggaggtcgcccagaagctcgcgagcgacaccttcacgctcgacgacttcctcaagcag
atgcagcagctgcgcggcaaggggtcgctcaagaagatgatgggcatgctccccggcatg
ggcgccatgaaggagcagctggagaacttcgacgagaaggagatcgtccgcaccgaggcc
atcatccagtcgatgacgaaggcggagcgccagaacccgaagctgctcaacggctcgcgc
cggctccgcatcgcccgcggatccggcatgaccgtcaccgacgtcaacggcctcgtgcag
cgcttcgagcaggcctcgaagatgatgcgcacggtcgcccgcggcggcatgccgcagatc
cccggcatgggcccgatgcccggcgcgcactccagccgcaagcccgtgcagcagaagaag
aagggctcgaagtcgggcaacccggccaagcgcgcgcaggagaacgcggcgctcgcgtcg
ggccagcgcatcggcggccccacggcccccgcgggatccggcttcggcctggccggtgcg
gcgaagggcggcgcggacggcgccccgagcgaggaggagctcgcctcgctgcagaagttc
ctcgggcgctga
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