Clavibacter californiensis: FGD68_09580
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Entry
FGD68_09580 CDS
T08592
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FGD68_09580 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaf03019
]
FGD68_09580 (orn)
03009 Ribosome biogenesis [BR:
ccaf03009
]
FGD68_09580 (orn)
Messenger RNA biogenesis [BR:
ccaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FGD68_09580 (orn)
Ribosome biogenesis [BR:
ccaf03009
]
Eukaryotic type
Pre-60S particles
RNases
FGD68_09580 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UKF79055
LinkDB
All DBs
Position
complement(1969656..1970276)
Genome browser
AA seq
206 aa
AA seq
DB search
MGNNADRLVWIDCEMTGLDLAIDELVEVAVVVTDFDLVPVDDGFTIVINPDPAALANMGE
FVTEMHRSSGLLEEIPSGVSLADAEFAVLEYLLQHVPNGGKAPIAGNTIGTDRAFLAKYM
PRVDAHLHYRSVDVSSIKVLAKEWFPRIYFNSPAKNGGHRALADILESIRELEYYRRAAF
VPAPGPATDDVQAISADVTSAWAARL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaacgcggaccggctggtgtggatcgactgcgagatgacggggctcgacctc
gcgatcgacgagctggtggaggtcgcggtggtcgtcaccgacttcgacctggtgcccgtc
gacgacggcttcacgatcgtgatcaatcccgaccccgcggcgctcgccaacatgggcgag
ttcgtcaccgagatgcaccgctcctcggggctgctcgaggagatcccgtcgggcgtgagc
ctggccgacgccgagttcgcggtgctcgagtacctgctgcagcacgtgccgaacggcggc
aaggcccccatcgcgggcaacaccatcggcaccgaccgcgcgttcctcgcgaagtacatg
ccccgcgtcgacgcgcacctccactaccgcagcgtcgacgtctcctccatcaaggtgctc
gcgaaggagtggttcccccggatctacttcaactcccccgcgaagaacggcggacaccgc
gccctcgccgacatcctcgagtcgatccgcgagctggagtactaccggcgcgcggcgttc
gtcccggcgccggggcccgccacggacgacgtgcaggccatctccgcggacgtgacgtcc
gcgtgggccgcgcggctgtag
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