Clavibacter californiensis: FGD68_10135
Help
Entry
FGD68_10135 CDS
T08592
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03030
DNA replication
ccaf03430
Mismatch repair
ccaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGD68_10135 (holA)
03430 Mismatch repair
FGD68_10135 (holA)
03440 Homologous recombination
FGD68_10135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaf03032
]
FGD68_10135 (holA)
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_10135 (holA)
Enzymes [BR:
ccaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGD68_10135 (holA)
DNA replication proteins [BR:
ccaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGD68_10135 (holA)
DNA repair and recombination proteins [BR:
ccaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGD68_10135 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UKF79160
LinkDB
All DBs
Position
2089156..2090184
Genome browser
AA seq
342 aa
AA seq
DB search
MATRTSRSTAAKPSAAIPQLSWDAVRPAPIVLVSGTEALLADRAMRRLRDILTAEDPRIE
VSDIEADSYAPGELITLASPSLFAEPRLIRIVNVEKCSDQFLLDAVAYLDQPADDTYVVL
RHAGGVRGKKLLDAVRAGTGGGIEVVCAELKKDSEKHDFAVAEFRAAKRSITPGAVRQLV
AAFQDDVSELASACQQLISDTAHEITEVTVDQYYGGRVEINAFAVADSAIAGRGGEALVL
LRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGASGQLASKLGMAPWQVDRARRDLQLWD
DAGLGRAIEALAEADAQVKGGGRDPVYSLERMVRTVASHGRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggacgtcccgcagcacggcggcgaagccctccgcggccatcccgcagctc
tcctgggacgcggtgcggccggcgcccatcgtcctggtgtccggcaccgaggccctcctc
gccgaccgggcgatgcgacgcctccgcgacatcctcacggcggaggacccccgcatcgag
gtctccgacatcgaggccgactcctacgcgcccggcgagctcatcacgctcgcgagcccg
tccctgttcgcggagccgcggctcatccgcatcgtcaacgtggagaagtgctcggaccag
ttcctgctcgacgcggtggcgtacctcgaccagcccgccgacgacacctatgtggtgctc
cggcacgccgggggagtgcgcggcaagaagctgctcgacgccgtgcgcgcgggcaccggc
ggcggcatcgaggtcgtctgcgcggagctcaagaaggacagcgagaagcacgacttcgcc
gtcgccgagttccgggccgcgaagcgctcgatcacgccgggtgcggtacgacagctcgtg
gccgcgttccaggacgacgtgagcgagctcgcgtcggcgtgccagcagctcatctcggac
accgcgcacgagatcaccgaggtcacggtcgaccagtactacggcggccgggtcgagatc
aacgcgttcgcggtcgcggactcggcgatcgccggccgcggcggcgaggcgctcgtcctg
ctccgccacgctctcacctcgggcgcggaccccgtgccgctcatcgccgcgttcgcgatg
aagatccgcacgatggcgaaggtgtcgggcgtctcgggcgcgtcgggccagctggcgtcg
aagctcggcatggcgccgtggcaggtcgaccgcgcccgccgcgacctgcagctctgggac
gacgcgggtctcggccgggccatcgaggccctcgccgaggcggacgcgcaggtgaagggc
ggcggacgcgatcccgtgtactcgctggagcgcatggtgcgcaccgtcgcctcgcacggc
cgggactga
DBGET
integrated database retrieval system
