Clavibacter californiensis: FGD68_10415
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Entry
FGD68_10415 CDS
T08592
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00051
Fructose and mannose metabolism
ccaf00541
Biosynthesis of various nucleotide sugars
ccaf01100
Metabolic pathways
ccaf01250
Biosynthesis of nucleotide sugars
Module
ccaf_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
FGD68_10415 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FGD68_10415 (gmd)
Enzymes [BR:
ccaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
FGD68_10415 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
UKF79210
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Position
complement(2147725..2148777)
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AA seq
350 aa
AA seq
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MAKKAFITGITGQDGSYLAELLLAKGYEVHGLIRRSSTFNTSRIDHLYQDPHEEGAKLFL
HYGDLSDGSRLTTLMMQIQPDEVYNLAAQSHVRVSFDEPEHTADTTGTGTIRLLEAVRLS
GIETRFYQASSSELYGATPPPQSETTPFYPRSPYGAAKLYSFWITKNYREAYDMFAVNGI
LFNHESPRRGETFVTRKITRAVAAIKAGTQDHVYLGNLDSIRDWGYAAEYVEGMWRMLQA
DEPDDFVLATGGNFTVRDFLETAFSHAGLDWSDHVRFDPRYLRPTEVDALVGDATKAEEK
LGWKATVDTTMLARIMVDADIAALEAEGRPWIDTVRLASWGTAEPTAVEA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaggctttcatcaccggcatcaccgggcaggacggctcgtacctggcagag
ctgctgctcgccaagggctacgaggtccacggcctcatccgccgctcgtcgacgttcaac
acgtcccgcatcgaccacctgtaccaggacccgcacgaggagggcgcgaagctcttcctc
cactacggcgacctgagcgacggctcgcgcctcacgacgctgatgatgcagatccagccc
gacgaggtctacaacctcgcggcccagtcgcacgtgcgcgtctccttcgacgagccggag
cacaccgccgacacgacgggcaccggcaccatccggctgctcgaggccgtgcgtctgtcg
ggcatcgagacccgcttctaccaggcctcctcgagcgagctgtacggggcgactcccccg
ccgcagagcgagaccacgccgttctacccgcgctcgccgtacggggccgcgaagctctac
agcttctggatcacgaagaactaccgcgaggcctacgacatgttcgccgtcaacgggatc
ctgttcaaccacgagtcgccccgccgcggcgagaccttcgtgacccgcaagatcacgcgc
gcggtcgccgccatcaaggcaggcacgcaggaccacgtctacctcggcaacctcgacagc
atccgcgactggggatacgccgccgagtacgtcgagggcatgtggcggatgctgcaggcc
gacgagcccgacgacttcgtgctcgcgaccggcggcaacttcaccgtgcgcgacttcctc
gagaccgcgttctcgcacgccggcctcgactggtccgaccacgtgcgcttcgacccgcgg
tacctccgccccaccgaggtcgacgccctggtgggcgacgccacgaaggccgaggagaag
ctgggctggaaggccacggtcgacaccacgatgctcgcccggatcatggtggacgccgac
atcgccgcgctcgaggccgaggggcgcccgtggatcgacacggtgcggctcgcgagctgg
ggtaccgccgagccgaccgcggtcgaggcgtga
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