Clavibacter californiensis: FGD68_10640
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Entry
FGD68_10640 CDS
T08592
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00010
Glycolysis / Gluconeogenesis
ccaf00020
Citrate cycle (TCA cycle)
ccaf00260
Glycine, serine and threonine metabolism
ccaf00280
Valine, leucine and isoleucine degradation
ccaf00310
Lysine degradation
ccaf00380
Tryptophan metabolism
ccaf00620
Pyruvate metabolism
ccaf00630
Glyoxylate and dicarboxylate metabolism
ccaf00640
Propanoate metabolism
ccaf00670
One carbon pool by folate
ccaf00785
Lipoic acid metabolism
ccaf01100
Metabolic pathways
ccaf01110
Biosynthesis of secondary metabolites
ccaf01120
Microbial metabolism in diverse environments
ccaf01200
Carbon metabolism
ccaf01210
2-Oxocarboxylic acid metabolism
ccaf01240
Biosynthesis of cofactors
Module
ccaf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ccaf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccaf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ccaf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FGD68_10640 (lpdA)
00020 Citrate cycle (TCA cycle)
FGD68_10640 (lpdA)
00620 Pyruvate metabolism
FGD68_10640 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FGD68_10640 (lpdA)
00640 Propanoate metabolism
FGD68_10640 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FGD68_10640 (lpdA)
00280 Valine, leucine and isoleucine degradation
FGD68_10640 (lpdA)
00310 Lysine degradation
FGD68_10640 (lpdA)
00380 Tryptophan metabolism
FGD68_10640 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FGD68_10640 (lpdA)
00670 One carbon pool by folate
FGD68_10640 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaf04147
]
FGD68_10640 (lpdA)
Enzymes [BR:
ccaf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FGD68_10640 (lpdA)
Exosome [BR:
ccaf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FGD68_10640 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
AlaDh_PNT_C
DAO
GIDA
FAD_oxidored
FAD_binding_2
Amino_oxidase
3HCDH_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
UKF79253
LinkDB
All DBs
Position
complement(2191952..2193325)
Genome browser
AA seq
457 aa
AA seq
DB search
MSEQNFDVVVLGGGSGGYAAALRAVQLGKTVGLVEKGKLGGTCLHRGCIPTKALLHSAEV
ADVSRESEKYGVNVTFDGVDIARVNAYREAIVASKYKGLQGLIKARGITVIEGEGRLTSG
TTVQVGDQTVTGKSIVLATGSYSRTLPGLEIGGRVITSEQALELDYIPKKVAILGGGVIG
VEFASVWRSFGVDVQIIEALPHLVPNEEESISKQFERAFRKRGIAFSLGVRFKSVTQDDQ
GVQVALEDGTTYDADLLLVAVGRGPATQGLGFEEAGVKTDRGFVLTDERLQTSVPGVYAV
GDIVPGLQLAHRGFQQGIFVAEEIAGNKPVVVEDINIPKVTYSDPEVASVGYSEAKAAEK
FGADKVSSYEYNLGGNGKSSILGTAGSIKVVRVQDGPVVGIHMIGARVGELIGEGQLIVN
WEAYPEDVANLVHAHPTQNEALGEAHLALAGTPLHAL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaacagaactttgacgtggtggtgctcggcggcgggagcggtggctatgcagcc
gccctccgtgcggtgcagctgggcaagaccgtgggcctcgtggagaagggcaagctgggc
ggcacgtgcctgcaccgcggctgcatccccaccaaggcgctcctgcactcggccgaggtc
gccgacgtctcgcgggagtcggagaagtacggcgtcaacgtcacgttcgacggggtggac
atcgcccgcgtcaacgcctatcgcgaggccatcgtcgccagcaagtacaagggcctacag
gggctcatcaaggcccgcggcatcaccgtcatcgagggcgaggggcgcctcacctccggc
acgaccgtccaggtaggcgaccagaccgtcaccgggaagagcatcgtcctcgcgacgggc
tcctactcccgcacgctccccggcctcgagatcggcggccgcgtcatcacgagcgagcag
gcgctcgagctcgactacatcccgaagaaggtcgcgatcctgggcggcggcgtcatcggc
gtcgagttcgcctccgtctggcgctccttcggcgtcgacgtgcagatcatcgaggccctc
ccccacctcgtgcccaacgaggaggagtcgatcagcaagcagttcgagcgggcgttccgc
aagcgcggcatcgcgttctcgctcggtgtgcgcttcaagtcggtcacccaggacgaccag
ggcgtccaggtcgccctcgaggacggcacgacgtacgacgccgacctcctgctcgtcgcc
gtgggccgcggcccggcgacccaggggctcggattcgaggaggcgggcgtgaagaccgac
cgcggcttcgtcctgacggacgagcggctccagaccagcgtccccggcgtctacgccgtc
ggcgacatcgtccccggcctgcagctcgcgcaccgcgggttccagcagggcatcttcgtc
gccgaggagatcgcgggcaacaagcccgtggtcgtcgaggacatcaacatccccaaggtc
acctactccgaccccgaggtcgcgagcgtcggctacagcgaggcgaaggccgccgagaag
ttcggcgccgacaaggtctcgagctacgagtacaacctcggtggcaacggcaagagctcc
atcctcggcacggccggttccatcaaggtcgtccgcgtgcaggatgggcccgtcgtcggc
atccacatgatcggcgcccgtgtcggcgagctcatcggcgagggccagctcatcgtgaac
tgggaggcctaccccgaggacgtcgccaacctggtgcacgcccaccccacccagaacgag
gcgctcggcgaggcgcacctggctctcgccggaacccctctgcacgccctgtag
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