Clavibacter californiensis: FGD68_10685
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Entry
FGD68_10685 CDS
T08592
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccaf
Clavibacter californiensis
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaf03032
]
FGD68_10685
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_10685
Enzymes [BR:
ccaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FGD68_10685
DNA replication proteins [BR:
ccaf03032
]
Prokaryotic type
DNA Topoisomerases
FGD68_10685
DNA repair and recombination proteins [BR:
ccaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FGD68_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
UKF79262
LinkDB
All DBs
Position
complement(2203868..2206414)
Genome browser
AA seq
848 aa
AA seq
DB search
MSPSTTNTTPDEPAERIEDVDVSTEMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYQ
MSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDAMVRMAQSFTLRVPLIDGHGNFGS
LDDGPAAPRYTEARLAASALAMVEGLDEDVVDFVPNYDNAFMQPAVLPAAFPNLLVNGAS
GIAVGMATNMVPHNLIEVVGAARHLIDHPDASLDDLMAFVPGPDLPTGGTIIGLSGVKDA
YLTGRGSFKTRARVSVESLTPRKSGLVVTELPYLVGPEKVIEKIKDGVQNKKLSGITNVT
DLTDRTHGLRLVIEIKTGFNPEAVLEQLYRYTPLEDGFSINNVALVDGSPQTLGLKELLQ
VYVAHRLEVVTRRTRYRLARRQERLHLVLGLLIAILDIDEVIQVIRGSDDTEQARARLMD
VFDLSTLQADYILELRLRRLTRFSRIELEEERDRLQAEIAELEAILADPRRLRALVSTEL
QEVADRFGTPRRTLLTEAAPSVAGASSRRAAPVLEIADVPCRVLLSTTGRAVRVDLPTDA
PGTPLQTVRRSSQDAVLTAIETTSRTRIGAITNIGRLITMTPVDLPVVPVASVQLGAGVR
IRDYLGLTDRKERVVALVALGTDEAIALGTRQGVVKRIAPSALPAKPEFEVIALKKGDEV
VGARQGAETDELVFVTSEAQLLHFPAVSVRPQGIQAGGVAGVNLGAGARVLFFSSVAPEG
AEVVTISASSATIAGVDPGRAKVSAFGDFPRKGRATGGVRAHAYLKGEDHLALAWVGPGP
ALAVGAAGEVRQLPPTGMKRDGSGIPLEKAIGSVGQAVTPAEAPDAASGAAAGIVEPSAE
DGSTPLET
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctccaccacgaacaccacgcccgacgagcccgccgagcggatcgaggacgtc
gacgtctccaccgagatggagaactcgttcctcgagtacgcgtactcggtcatctactcg
cgggccctgcccgacgcgcgcgacggcctcaagcccgtgcagcgccggatcctgtaccag
atgagcgagatgggcctccgccccgaccgaggccacgtgaagtccgcccgcgtcactggc
gaggtcatgggcaagctccacccgcacggcgactccgccatctacgacgcgatggtgcgc
atggcgcagtcgttcacgctgcgggttccgctcatcgacgggcacggcaacttcggatcg
ctcgacgacggtccggccgccccccgctacacggaggcccggctcgccgcgtccgcgctc
gcgatggtcgagggcctcgacgaggacgtcgtcgacttcgtcccgaactacgacaacgcg
ttcatgcagccggccgtcctccccgcggcgttcccgaacctgctggtcaacggcgcgagc
ggcatcgcggtcggcatggcgacgaacatggtcccccacaacctgatcgaggtcgtcggc
gccgcgcgccatctcatcgaccacccggacgccagcctggacgacctcatggccttcgtg
ccggggccggatctccccacgggaggcacgatcatcggcctgtcgggcgtcaaggacgcg
tacctcaccggccgcggcagcttcaagacccgcgcgcgcgtctccgtcgagagcctcacg
ccccggaagtcggggctcgtcgtcaccgagctgccgtacctggtcggccccgagaaggtc
atcgagaagatcaaggacggcgtccagaacaagaagctgtcgggcatcaccaacgtcacc
gacctgaccgaccgcacgcacgggctgcggctcgtgatcgagatcaagacgggcttcaac
cccgaggccgtgctcgagcagctctaccgctacacgccgctcgaggacggcttcagcatc
aacaacgtcgcgctcgtcgacggcagcccgcagacgctcgggctgaaggagctgctgcag
gtctacgtggcgcaccggctcgaggtggtcacgcgccgcacgcgctaccggctcgcccgc
cggcaggagcggctgcacctcgtgctcgggctgctgatcgccatcctcgacatcgacgag
gttatccaggtcatccgcggcagcgacgacaccgagcaggcgcgcgcccgactcatggac
gtgttcgacctgtcgacgctgcaggccgactacatcctggagctccgcctccgccggctc
acgcggttcagccgcatcgagctcgaggaggagcgggacaggctccaggctgagatcgcc
gagctcgaggcgatcctcgccgatccccgccggctccgggccctcgtctcgaccgagctg
caggaggtcgccgaccgcttcggcacgccgcgccggaccctgctcaccgaggccgcgccg
agcgtcgccggggcgtcgagccgccgtgccgcgcccgtgctcgagatcgcggacgtgccc
tgccgggtgctgctgtcgacgaccgggcgcgcggtccgcgtcgacctgccgacggacgcg
ccgggcacgcccctgcagaccgtccgccgcagctcccaagacgcggtcctcacggcgatc
gagaccacgagccgcacgcgcatcggcgcgatcacgaacatcggccggctcatcacgatg
acgcctgtcgacctccccgtcgtcccggtcgcgagcgttcagctgggcgccggcgtccgg
atccgcgactacctgggtctcaccgacaggaaggagcgcgtcgtcgcgctcgtggcgctg
ggcaccgacgaggccatcgcgctcggcacgcgccagggcgtcgtcaagcgcatcgccccg
tcggccctgcccgcgaagcccgagttcgaggtcatcgcgctgaagaagggcgacgaggtc
gtcggtgcgcggcagggcgcggagacggacgagctcgtcttcgtcaccagcgaggcgcag
ctgctgcacttccccgcggtgtccgtgcgaccccagggcatccaggcgggcggcgtcgcc
ggcgtcaacctcggcgcaggcgcgcgcgtgctgttcttctcctccgtcgcgcccgagggt
gccgaggtcgtcacgatctcggcgtcgtccgccaccatcgcgggcgtggatcccggccgc
gccaaggtgagcgcgttcggcgacttccctcgcaagggacgcgccacgggcggggtccgc
gcgcacgcgtacctgaagggcgaggaccacctcgccctcgcctgggtcggccccgggccc
gccctcgcggtcggggcggccggcgaggtcaggcagctgccgcccacgggcatgaagcgc
gacggctcgggcatcccgctcgagaaggcgatcgggagcgtcggccaggcggtcaccccg
gccgaggcgccggatgcggcgtccggcgcggccgcgggcatcgtcgagccgtcggccgag
gacggctcgaccccgctcgagacgtag
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