KEGG   Clavibacter californiensis: FGD68_11005
Entry
FGD68_11005       CDS       T08592                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ccaf  Clavibacter californiensis
Pathway
ccaf03030  DNA replication
ccaf03430  Mismatch repair
ccaf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FGD68_11005
   03430 Mismatch repair
    FGD68_11005
   03440 Homologous recombination
    FGD68_11005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccaf03032]
    FGD68_11005
   03400 DNA repair and recombination proteins [BR:ccaf03400]
    FGD68_11005
Enzymes [BR:ccaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FGD68_11005
DNA replication proteins [BR:ccaf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FGD68_11005
DNA repair and recombination proteins [BR:ccaf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FGD68_11005
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like Tenui_N
Other DBs
NCBI-ProteinID: UKF79323
LinkDB
Position
2275829..2276530
AA seq 233 aa
MTSRWHDTLASFDLETTGVDVETARIVTACIVVLDAQGEVLERHDWLADPGVEIPAGAAA
IHGVTTERARAEGRDAAVVVLEIVTTIREMFARGLALVVYNAPYDLTLLNREAVRHGVEP
LRDTGPVIDPLVIDKAVDTYRRGKRTLSVAAEHYGVRLDDAHDAGADAIAAGRVAQAIVG
RYADQLDIPVLDLHDRQVDWSRVQAESFQDYMRRTRDPAFTTSGAWPERHAGS
NT seq 702 nt   +upstreamnt  +downstreamnt
atgacctcccgctggcacgacaccctggcctcgttcgacctcgagacgacgggggtggac
gtcgagaccgcgcgcatcgtcacggcgtgcatcgtcgtcctcgacgcgcagggcgaggtc
ctcgagcggcacgactggctcgcggatcccggcgtcgagatccccgcgggcgcggccgcc
atccacggcgtcaccacggagcgggcccgcgccgaggggcgcgacgccgcggtggtcgtc
ctcgagatcgtcaccaccatccgcgagatgttcgcccgcggcctcgcgctcgtcgtctac
aacgcgccctacgacctcacgctcctcaaccgggaggccgtgcggcacggggtcgagccg
ctgcgcgacaccggccccgtcatcgacccgctcgtcatcgacaaggccgtggacacctac
cgccgcggcaagcgcacgctgtccgtcgccgcggagcactacggcgtccggctcgacgac
gcgcacgacgcgggagcggacgccatcgccgccggtcgggtcgcccaggccatcgtcggc
cgctacgccgatcagctcgacatccccgtgctggacctgcacgaccgccaggtcgactgg
tcgcgcgtgcaggcggagagcttccaggactacatgcggcgcacgcgcgatcccgcgttc
acgacgtccggtgcgtggcccgagcggcacgccgggtcctga

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