Clavibacter californiensis: FGD68_11205
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Entry
FGD68_11205 CDS
T08592
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03030
DNA replication
ccaf03410
Base excision repair
ccaf03420
Nucleotide excision repair
ccaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGD68_11205 (polA)
03410 Base excision repair
FGD68_11205 (polA)
03420 Nucleotide excision repair
FGD68_11205 (polA)
03440 Homologous recombination
FGD68_11205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaf03032
]
FGD68_11205 (polA)
03400 DNA repair and recombination proteins [BR:
ccaf03400
]
FGD68_11205 (polA)
Enzymes [BR:
ccaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGD68_11205 (polA)
DNA replication proteins [BR:
ccaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FGD68_11205 (polA)
DNA repair and recombination proteins [BR:
ccaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FGD68_11205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGD68_11205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
ThiG
Motif
Other DBs
NCBI-ProteinID:
UKF79361
LinkDB
All DBs
Position
complement(2319693..2322377)
Genome browser
AA seq
894 aa
AA seq
DB search
MPNTEKPTLLVIDGHSLAFRAFYALPAESFQNREGQHTNAVHGFIAMLINLLQKEKPTHV
GVAFDISRFSFRTREYPEYKGTRGETPVEFTGQVPLLERALKTMNIPTLTKEDHEADDIL
ATLATQGREQGFRVLVVSGDRDAIQLVNDDVTLLYPSTQGVSQLTRYDAEKVFEKYGVQP
EMYPDIAALVGETSDNLIGVDKVGPKTAVKWLNQYGSLDAVLEHRDEISGKVGDNLRAQY
ENVIRNRRLNRLLTDVELPLGPADLERKPIDEPALREVFQVLEFKQLLDRVLKLEGSGAS
VSSEGTPVGTVEQEPSTAPQAPKQQQLLDEELEKWIRTHSAASPHGLGLTVETHDGRPVG
FGLASATEAVTLPWQEGRADYAPFERWLASDAPKIMSDAKLQVKAMRRAGLEVQGLAFDV
LVAGWLLRPGFTDKTLAALVSRYLMEDLPEPDANQLVPETEALTAPVEAWYTLRVEHALR
EVLDERTLGVMVDIEMPTLLVLVEMELRGVATDRAGLAELSAQLQERITDLAQRAFAEIG
KEINLGSPKQLQEVLFDQLGMPKTRANKTGFSTDAGALADLQASNPHPFLDLLLEHRDAS
KLRQIIQTLERGIGDDERIHTTYVQTGTTTGRISSNDPNLQNIPVRTEAGRRIRSAIRVG
EGYETLLTADYSQIEMRIMAHLSGDAGLIEAFAAGEDLHRFVGSRIFGVEPADVSAEMRT
KVKAMSYGLAYGLSAFGLSKQLRIPSSEAKQLMTDYFARFGAVRDYLRQVVEEARAAGYT
ETIFGRRRPFPDLNSPNRVLRDNAERAALNAPIQGSAADIMKIAMIRIEADMRERDMASR
MLLQVHDELILEVAAGEWDALEAIVTDRMAHAADLRVPLEVQVGRGDSWAAAAH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacacggaaaagcctaccctcctcgtcatcgacggccattccctggcgttccgg
gccttctacgccctgccggcggagagcttccagaaccgcgaggggcagcacacgaacgcc
gtgcacggcttcatcgcgatgctcatcaacctcctgcagaaggagaagcccacgcacgtg
ggcgtcgcgttcgacatctcgcgcttctcgttccgcacgcgggagtatccggagtacaag
ggcacgcgcggcgagacgcccgtggagttcaccgggcaggtgccgctgctcgagcgcgcg
ctgaagaccatgaacatccccaccctcaccaaggaggaccacgaggcggacgacatcctc
gcgaccctggccacccagggtcgcgagcaggggttccgcgtgctcgtcgtctcgggcgac
cgcgacgccatccagctcgtcaacgacgacgtcacgctgctctacccgtccacccagggc
gtctcgcagctcacgcgctacgacgcggagaaggtgttcgagaagtacggcgtgcagccc
gagatgtacccggacatcgcggcgctcgtgggggagacgagcgacaacctcatcggcgtc
gacaaggtcggtccgaagaccgccgtcaagtggctcaaccagtacggctccctcgacgct
gtcctcgagcaccgggacgagatctcggggaaggtcggcgacaacctccgcgcccagtac
gagaacgtcatccgcaaccgccgcctcaaccggctgctcaccgacgtcgagctgccgctc
ggcccggccgacctcgagcgcaagcccatcgacgagcccgccctccgcgaggtgttccag
gtgctggagttcaagcagctgctcgaccgggtgctgaagctcgagggatcgggcgcctcc
gtgtcgagcgagggcacgcccgtgggcacggtcgagcaggagccgtccaccgcgccgcag
gccccgaagcagcagcagctgctcgacgaggagctcgagaagtggatccggacgcacagc
gccgcgtcgccgcacggcctgggcctcacggtcgagacgcacgacgggagacccgtcggc
ttcgggctcgcgagcgcgaccgaggccgtgaccctgccgtggcaggagggccgcgccgac
tacgcgccgttcgagcgctggctcgcgagcgacgcgccgaagatcatgtccgacgccaag
ctgcaggtgaaggccatgcgccgcgccggcctcgaggtccaggggctcgcgttcgacgtc
ctcgtcgcgggctggctgctgcgtcccggcttcaccgacaagacgctcgccgcgctcgtg
agccgctacctcatggaggacctgcccgagcccgacgccaaccagctcgtccccgagacc
gaggcgctcacggcgccggtcgaggcctggtacacgctccgggtcgagcacgcgctgcgc
gaggtgctcgacgagcgcacgctcggcgtcatggtcgacatcgagatgccgacgctgctc
gtgctcgtggagatggagctgcgcggcgtggccaccgaccgcgccggcctcgcggagctg
tcggcgcagctgcaggagcgcatcaccgacctcgcgcagcgcgcgttcgcggagatcggc
aaggagatcaacctcggctcgccgaagcagctgcaggaggtcctcttcgatcagctcggc
atgccgaagacccgcgccaacaagaccggcttctcgaccgacgccggcgcgctggccgac
ctccaggcctcgaacccgcacccgttcctcgacctgctgctcgagcaccgcgacgcgagc
aagctgcgccagatcatccagacgctcgagcggggcatcggcgacgacgagcggatccac
accacctacgtgcagaccggcacgacgaccggccgcatctcctccaacgacccgaacctg
cagaacatccccgtgcgcacggaggcgggccgccgcatccgcagcgccatccgtgtcggc
gagggctacgagaccctgctcaccgccgactactcgcagatcgagatgcggatcatggcg
catctctccggcgacgcgggcctcatcgaggccttcgcggcgggggaggacctgcaccgc
ttcgtcggatcccgcatcttcggggtggagccggctgacgtcagcgccgagatgcgcacc
aaggtgaaggccatgagctacggcctggcctacgggctcagcgccttcgggctgtccaag
cagctgcgcatcccatcgtccgaggcgaagcagctcatgacggactacttcgcgcgcttc
ggggccgtgcgcgactacctccgccaggtcgtggaggaggcgcgcgccgccgggtacacg
gagacgatcttcggccgccgccgtccgttccccgacctcaacagcccgaaccgcgtcctc
cgcgacaacgccgagcgggctgccctcaacgcgcccatccagggctcggcggccgacatc
atgaagatcgccatgatccgcatcgaggccgacatgcgcgagcgcgacatggcatcgcgc
atgctgctccaggtgcacgacgagctcatcctcgaggtcgccgcgggggagtgggacgcg
ctcgaggcgatcgtcacggaccgcatggcccacgcggcggacctccgggtgccgctcgag
gtgcaggtgggccgcggcgactcgtgggccgccgccgcgcactga
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