Clavibacter californiensis: FGD68_11345
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Entry
FGD68_11345 CDS
T08592
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00220
Arginine biosynthesis
ccaf00240
Pyrimidine metabolism
ccaf00250
Alanine, aspartate and glutamate metabolism
ccaf01100
Metabolic pathways
ccaf01110
Biosynthesis of secondary metabolites
ccaf01240
Biosynthesis of cofactors
Module
ccaf_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FGD68_11345 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FGD68_11345 (carB)
00220 Arginine biosynthesis
FGD68_11345 (carB)
Enzymes [BR:
ccaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FGD68_11345 (carB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-ProteinID:
UKF79387
LinkDB
All DBs
Position
complement(2350726..2354016)
Genome browser
AA seq
1096 aa
AA seq
DB search
MPKRDDINSVLVIGSGPIVIGQAAEFDYSGTQACRVLREEGVRVILVNSNPATIMTDPDF
ADATYIEPITSEVLEKIIIKERPDAVLPTLGGQTALNAAIRLDELGILAKHGVELIGAKV
EAIQKGEDRQLFKDLVIESGADVARSHVAKTLEQAVEFAEDLGYPLVIRPSFTMGGLGSG
FAHTRQELERMVADGLQSSPTTEVLLEESILGWKEYELELMRDTADNTVVVCSIENVDPV
GVHTGDSITVAPALTLTDREYQHMRDIGIDIIRRVGVDTGGCNIQFAVDPADGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYRLDEIPNDITKVTPASFEPTLDYVVVKVPR
FAFEKFPAADAELTTTMKSVGEAMAIGRNYSTALQKALRSLEKRGSSFHWGPETRSVDEL
LETSRTPTDGRIVTVQQALRAGATAEQVFDATKIDPWFIDQIVLINEVADAVRDAGSLDA
DTLREAKDHGFSDAQIAEIRGLTEQEVRDARHAADIRPVYKTVDTCAGEFPALTPYHYSS
YDSETEIVPSERRKVIILGSGPNRIGQGIEFDYSCVHASFALADAGFETIMINCNPETVS
TDYDTSDRLYFEPLTLEDVLEIVHVEQQAGELVGVVVQLGGQTALGLAKGLEAAGVPILG
TSPSAIDLAEERGLFSGILDAAGLVAPRNGTAVAIDEAVVVAEGIGYPVLVRPSYVLGGR
GMEIVFDTATLHDYFLRMADQGIIGEGKPLLIDRFLDDAIEIDIDAIYDGTELYVGGVME
HIEEAGIHSGDSSCTLPPVTLGRGQIQQVVDATRAIAEGVGVRGLLNVQFAIGAGVLYVL
EANPRASRTVPFVSKALGIPLAKAASLVMVGTSIAELKSSGLLPERDGSDVPMDSPVAVK
EAVLPFKRFRTKDGLIVDSVLGPEMRSTGEVMGIDRDFPRAFAKSQEAAFGGLPLSGTVF
VSVADRDKRSIVLPVLRLQQLGFEVLATAGTAEILSRNGIQARVVRKYSEEPAAGDSPSI
VDLINRDEVDVVINTPSGRTARADGYEIRAAAVAADKALFTTIAQLTAAVASFDAIRAGF
DVTSLQDYAIAREARR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcgacgacatcaacagcgtcctcgtcatcggctccgggccgatcgtcatc
ggccaggccgccgagttcgactactccggcacccaggcctgccgggtgctgcgtgaggag
ggcgtgcgcgtcatcctcgtgaactcgaaccccgccacgatcatgaccgacccggacttc
gccgacgcgacctacatcgagccgatcacgagcgaggtgctcgagaagatcatcatcaag
gagcgccccgacgcggtgctcccgacgctcggcggccagacggcgctgaacgcggccatc
cgcctcgacgagctcggcatcctcgccaagcacggcgtcgagctcatcggcgcgaaggtc
gaggcgatccagaagggcgaggaccggcagctcttcaaggacctcgtcatcgagtccggt
gccgacgtcgcccgctcgcacgtcgccaagacgctcgagcaggccgtggagttcgccgag
gacctcggctacccgctcgtgatccgcccgtccttcaccatgggcggcctcggctccggc
ttcgcgcacacacgccaggagctggagcgcatggtcgccgacggcctgcagtcgagcccc
acgaccgaggtgctcctcgaggagtcgatcctcggctggaaggagtacgagctcgagctc
atgcgcgacaccgccgacaacacggtcgtcgtctgctccatcgagaacgtcgacccggtc
ggcgtgcacacgggcgactcgatcacggtcgcgccggccctcacgctcaccgaccgcgag
taccagcacatgcgcgacatcggcatcgacatcatccgccgggtgggcgtcgacacgggc
ggctgcaacatccagttcgcggtggaccccgccgacggccgcctcatcgtcatcgagatg
aacccgcgcgtctcccgctccagcgccctcgcgtcgaaggcgacgggcttccccatcgcc
aagatcgcggcgaagctcgccatcggctaccgcctcgacgagatccccaacgacatcacc
aaggtcacgcccgcgagcttcgagcccacgctcgactacgtggtcgtgaaggtgccgcgc
ttcgcgttcgagaagttcccggccgcggacgccgagctcaccacgaccatgaagtcggtc
ggcgaggccatggccatcggccgcaactactccaccgcgctgcagaaggcgctgcgctcg
ctcgagaagcgcggatcctccttccactggggccccgagacccgctcggtcgacgagctg
ctcgagacgagccgcacgcccaccgacggccgcatcgtcacggtgcagcaggcgctgcgc
gcgggcgccacggcggagcaggtcttcgacgccacgaagatcgacccctggttcatcgac
cagatcgtgctcatcaacgaggtcgccgacgccgtgcgcgacgcaggctccctcgacgcc
gacacgctccgcgaggcgaaggaccacggcttctcggacgcgcagatcgccgagatccgc
ggcctcaccgagcaggaggtgcgcgacgcgcgccacgcggccgacatccgccccgtctac
aagacggtcgacacgtgcgcgggcgagttccccgcgctcacgccgtaccactactccagc
tacgactccgagacggagatcgtgccgtccgagcgccgcaaggtgatcatcctgggctcg
ggcccgaaccgcatcggccagggcatcgagttcgactactcgtgcgtgcacgcgtccttc
gcgctggcggacgccgggttcgagaccatcatgatcaactgcaacccggagacggtctcc
accgactacgacacgagcgaccggctctacttcgagccgctcacgctcgaggacgtgctc
gagatcgtgcacgtcgagcagcaggcgggcgagctcgtcggcgtcgtcgtgcagctcggc
ggccagaccgcgctcgggctcgccaagggcctcgaggccgcgggcgtcccgatcctcggc
acgagcccgtcggccatcgacctcgcggaggagcggggcctgttctccgggatcctcgac
gccgctggcctcgtcgcgccgcgcaacggcaccgcggtcgcgatcgacgaggccgtggtc
gtcgcggaggggatcggctaccccgtcctcgtccgcccgagctacgtgctcggcggccgc
ggcatggagatcgtcttcgacaccgccacgctgcacgactacttcctgcgcatggccgac
caggggatcatcggcgagggcaagcccctcctcatcgaccggttcctcgacgacgccatc
gagatcgacatcgacgcgatctacgacggcaccgagctgtacgtcggcggcgtcatggag
cacatcgaggaggccgggatccactcgggcgactcgagctgcacgctcccgcccgtgacc
ctcggccgcggccagatccagcaggtcgtcgacgcgacgcgcgccatcgccgagggcgtg
ggcgtgcgcggcctcctcaacgtgcagttcgcgatcggcgcgggcgtgctctacgtcctc
gaggcgaacccgcgcgcgagccgcacggtgccgttcgtctccaaggcgctcggcatcccg
ctcgcgaaggccgcgtcgctcgtcatggtcggcacgtccatcgccgagctgaagtcgtcc
gggctcctgcccgagcgcgacggatccgacgtcccgatggactcgcccgtcgccgtgaag
gaggccgtgctgcccttcaagcggttccgcacgaaggacggcctcatcgtcgactccgtg
ctcggcccggagatgcgctccaccggcgaggtcatgggcatcgaccgcgacttcccgcgc
gcgttcgcgaagagccaggaggcggcgttcggcggcctcccgctctcgggcacggtgttc
gtctcggtcgccgaccgcgacaagcgctcgatcgtgctgccggtgctccgcctccagcag
ctcggcttcgaggtgctggcgaccgcgggcacggcggagatcctcagccgcaacgggatc
caggcgcgcgtcgtccgcaagtacagcgaggagcccgccgcgggagactcgccgtcgatc
gtggacctgatcaaccgggacgaggtggacgtcgtcatcaacaccccgtcgggccgcacg
gcgcgcgcggacggctacgagatccgcgcggcggccgtcgcggccgacaaggcgctgttc
acgaccatcgcgcagctcaccgcggcggtcgcgtccttcgacgccatccgcgcgggcttc
gacgtgacgagcctgcaggactacgcgatcgcccgcgaggcccgcaggtga
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