Clavibacter californiensis: FGD68_11535
Help
Entry
FGD68_11535 CDS
T08592
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00750
Vitamin B6 metabolism
ccaf01100
Metabolic pathways
ccaf01240
Biosynthesis of cofactors
Module
ccaf_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FGD68_11535 (pdxS)
Enzymes [BR:
ccaf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FGD68_11535 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
TetR_C_27
OMPdecase
IGPS
NanE
DHO_dh
Glu_synthase
NMO
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
UKF79425
LinkDB
All DBs
Position
complement(2391002..2391904)
Genome browser
AA seq
300 aa
AA seq
DB search
MTDTNTTGQVGSSRVKRGLAEMLKGGVIMDVVNAEQARIAEDAGAVAVMALERVPADIRS
QGGVARMSDPDLIDQIKAEVSIPVMAKARIGHFVEAQVLQSLEVDYIDESEVLSPADYVN
HIDKWGFTVPFVCGATTLGEALRRITEGAAMIRSKGEAGTGDVSEATKHIRTIKSEIRAL
SALTHDEIYVAAKELQAPYDLVLEVSKTGQLPVVLFTAGGVATPADAAMMMQLGADGVFV
GSGIFKSGNPVARAKAVVTATALFNDPDAIAEASRGLGEAMVGINVADVPAPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaacaccaccggacaggtcggctcgagccgcgtcaagcgcggactcgcg
gagatgctcaagggcggcgtcatcatggacgtcgtcaacgccgagcaggcgcgcatcgcg
gaggacgcgggagcggtcgccgtcatggcgctcgagcgcgtgccggccgacatccgctcg
cagggcggcgtcgcccgcatgagcgaccccgacctcatcgaccagatcaaggccgaggtg
tccatccccgtcatggcgaaggcccgcatcggccacttcgtcgaggcgcaggtcctgcag
tccctcgaggtcgactacatcgacgagtccgaggtgctgagcccggccgactacgtgaac
cacatcgacaagtggggcttcaccgtgcccttcgtctgcggcgccaccacgctcggcgag
gcgctccgccgcatcaccgagggcgcggccatgatccgctccaagggcgaggcgggcacg
ggcgacgtctccgaggccaccaagcacatccgcacgatcaagtccgagatccgcgcgctc
agcgccctcacgcacgacgagatctacgtcgccgcgaaggagctgcaggcgccgtacgac
ctcgtgctcgaggtgtccaagacgggccagctgcccgtcgtcctcttcaccgcgggcggc
gtggccaccccggccgacgccgcgatgatgatgcagctcggcgccgacggcgtgttcgtc
ggatccggcatcttcaagtcgggcaacccggtcgcgcgcgcgaaggccgtcgtcacggcc
acggccctgttcaacgaccccgacgccatcgccgaggcgtcgcgcgggctgggcgaggcc
atggtcgggatcaacgtcgccgacgtccccgccccgcaccgcctcgccgagcgtggctgg
tag
DBGET
integrated database retrieval system
