Clavibacter californiensis: FGD68_11775
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Entry
FGD68_11775 CDS
T08592
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00470
D-Amino acid metabolism
ccaf00550
Peptidoglycan biosynthesis
ccaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FGD68_11775 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FGD68_11775 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccaf01011
]
FGD68_11775 (murD)
Enzymes [BR:
ccaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FGD68_11775 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccaf01011
]
Precursor biosynthesis
Amino acid ligase
FGD68_11775 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
F420_oxidored
2-Hacid_dh_C
Pyr_redox_2
Pyr_redox
GntR
YuA_Gp49
NAD_binding_7
Oxidored_nitro
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UKF79466
LinkDB
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Position
complement(2436506..2438050)
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AA seq
514 aa
AA seq
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MTDGTSDDGTALARPDSLHSWHDDWTGLRVAVLGLGRTGFSVADTLVELGADVLVVASDA
SPERLALLDVIGGRLVRPTEEEPVPGELVAFAPELVVVSPGYAPTHPLPAWATEAGIPLW
GDIELAWRVRDKTGAPAEWITITGTNGKTTTTQLTAALLQEGGVRAVPCGNIGLPVLDVV
RHPDGFDVLVVELSSHQLHYMRKVRPYSSAFLNLADDHLEWHGSRQAYAAAKGRVYADTR
VACVYNRADRATEDALRDADVQDGARAIGFGLDAPGPSDLGIVDGILCDRAFLEERLTSA
LELTTLDELRAVGLAAPHIVQNILAAAALARSYGVSPAVVRQALQRFELDSHRIERIGER
DGVAFVDDSKATNPHAASASLAAFPSVVWVVGGLLKGVELDDLIRAHASRLRAAVVIGVE
RAGVLAAFARHAPDVTVLEVAESDTEQVMRSAVRLAAGVAREGDTVLLAPAAASMDQFTD
YADRGRRFRTAVDHHLGGAADDTAPENDADPSRG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggcacctccgacgacggcacggcgctcgcgcgacccgactccctgcacagc
tggcacgacgactggaccggcctccgcgtcgccgtcctcggcctcgggcgcaccggcttc
tcggtggccgacacgctggtcgagctcggcgccgatgtgctcgtggtcgcgtccgacgcg
tcgcccgagcggctggcgctgctcgacgtgatcggcgggcgcctcgtgcggccgaccgag
gaggagcccgtccccggggagctcgtggccttcgcgcccgagctcgtcgtcgtgtcgccc
ggctacgcgccgacgcacccgctgcccgcatgggcgacggaggcggggatcccgctgtgg
ggcgacatcgagctcgcctggcgcgtgcgcgacaagacgggcgcgcccgccgagtggatc
accatcaccggcaccaacggcaagaccaccaccacgcagctcacggccgcgctcctccag
gagggcggggtgcgagcggtcccgtgcggcaacatcggcctgcccgtgctcgacgtcgtc
cgccacccggacggcttcgacgtgctcgtcgtcgagctctccagccaccagctgcactac
atgcgcaaggtgcggccctactcgagcgccttcctcaacctggccgacgaccacctcgag
tggcacggctcccgccaggcctacgcggccgcgaaggggcgggtctacgccgacacgcgc
gtcgcctgcgtctacaaccgcgccgaccgcgcgaccgaggacgcgctccgcgacgcggac
gtccaggacggcgcgcgcgccatcgggttcgggctcgacgcgccgggtccgagcgacctc
ggcatcgtcgacgggatcctctgcgaccgcgcgttcctcgaggagcggctcacctccgcg
ctcgagctgacgacgctcgacgagctgcgcgcggtgggcctcgcggcaccgcacatcgtg
cagaacatcctggccgcggccgcgctcgcccggtcctacggcgtctcgccggcggtggtg
cggcaggcgctccagcgcttcgagctcgacagccaccgcatcgagcggatcggggagcgc
gacggcgtcgccttcgtcgacgactcgaaggccaccaatccgcacgcggcgtccgcgtcg
ctcgcggccttcccctccgtggtgtgggtcgtcggcggcctcctcaagggcgtcgagctc
gacgacctgatccgcgcccacgcgtcacgcctgcgcgcggcggtcgtcatcggcgtcgag
cgcgccggggtcctcgcggcattcgcgcgacacgcgcccgacgtcaccgtcctcgaggtg
gccgagagcgacactgaacaggtcatgcggtccgccgtgcggctcgcggcgggcgtggcc
cgggagggcgacaccgtcctcctggccccggcggcggcatccatggaccaattcaccgac
tacgccgaccgaggacgccgattccggaccgcggtcgaccaccacctgggaggtgcggcg
gatgacactgcccccgagaacgacgcggacccctcgcgcggctga
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