Clavibacter californiensis: FGD68_11945
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Entry
FGD68_11945 CDS
T08592
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FGD68_11945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccaf02000
]
FGD68_11945
Transporters [BR:
ccaf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FGD68_11945
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_5
AAA_16
ABC_ATPase
Rad17
AAA
nSTAND_NTPase5
AAA_30
AAA_19
SRP54
ORC-CDC6-like
NACHT
AAA_28
RE_Alw26IDE
nSTAND1
AAA_25
nSTAND3
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UKF79499
LinkDB
All DBs
Position
2476403..2477554
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AA seq
383 aa
AA seq
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MTASAPTSPTAALPRAHDDGTGTAAPSGLVVAGLSKDLGGRTIVDDLHLDVARGELVALL
GPSGCGKTTTLRMIAGFLEPDRGSVVIGGRDVTAAGPAKRPSAMVFQNYALWPHLTVFKN
VAFPLTLKKLSKDEITRRVMAALETVNLGHHAHSRPTQVSGGEQQRAALARAIVQEPDLL
LLDEPLSNLDAKLRVKVREEIRDIQQRLRITTVMVTHDQDEALAISDRVAVMHQGRIEQV
SAPTELYARPRTLVVASFIGSMNLLPTPRLQGTTPETLTAGPPVAFAPTSADADVWAVRP
EDVTYAPRGIRPETDATSVVVRRVLPHGHFQELVLDAGGVEVRALVTASAPAVGEAGTVT
LRAVRHYRGGVLVPDGATAGDAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccgcccccacctcccccaccgccgctctcccgcgcgcgcacgacgacggc
accgggaccgccgcgccgtccggcctcgtcgtcgccgggctctccaaggacctcggcggc
cgcaccatcgtcgacgacctccacctcgacgtcgcgcgcggcgagctcgtcgcgctcctc
ggcccgtccggctgcggcaagaccaccacgctccgcatgatcgccgggttcctcgagccc
gaccgcggatccgtggtcatcggcggccgcgacgtcaccgccgccggccccgccaagcgg
ccgagcgcgatggtgttccagaactacgcgctctggccgcacctcaccgtgttcaagaac
gtcgccttcccgctcacgctgaagaagctgtccaaggacgagatcacccgtcgggtcatg
gccgcgctcgagaccgtgaacctcgggcaccacgcccactcgcgccccacgcaggtctcc
ggcggcgagcagcagcgcgcggcgctcgcccgggcgatcgtgcaggagcccgacctgctg
ctcctcgacgagccgctgtcgaacctcgacgccaagctgcgcgtgaaggtgcgcgaggag
atccgcgacatccagcagcggctgcggatcacgaccgtcatggtcacgcacgaccaggac
gaggcgctcgccatctccgaccgcgtcgccgtgatgcaccagggccgcatcgagcaggtg
tcggcccccacggagctctacgcccggccgcggaccctcgtggtcgcgtcgttcatcggc
agcatgaacctgctgccgacgccgcgcctgcagggcacgacgcccgagaccctcacagcc
ggcccgcccgtggcgttcgcgcccacctccgccgacgccgacgtctgggccgtccgcccc
gaggacgtgacctacgcgccgcgcgggatccggcccgagaccgacgcgacctccgtggtc
gtgcgccgggtgctgccgcacggccacttccaggagctcgtcctggacgcgggcggcgtg
gaggtgcgcgcgctcgtgaccgcatccgcgcccgcggtcggcgaggccggcaccgtgacg
ctccgcgcggtgcggcactaccgcggcggggtcctggtgccggacggcgccacggcgggc
gacgcgcgatga
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