Clavibacter californiensis: FGD68_12450
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Entry
FGD68_12450 CDS
T08592
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FGD68_12450 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccaf01007
]
FGD68_12450 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaf03016
]
FGD68_12450 (pheT)
Enzymes [BR:
ccaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FGD68_12450 (pheT)
Amino acid related enzymes [BR:
ccaf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FGD68_12450 (pheT)
Transfer RNA biogenesis [BR:
ccaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FGD68_12450 (pheT)
Prokaryotic type
FGD68_12450 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
UKF79592
LinkDB
All DBs
Position
complement(2584164..2586707)
Genome browser
AA seq
847 aa
AA seq
DB search
MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISGPVVVGQVLEASPEPQT
NGKTINWCQVRVAPEGATAADGGEDVRGIVCGAHNFVVGDKVVVSLPGAVLPGPFPISSR
KTYGHVSDGMIASSRELGLGEEHDGILVLSSLGLDPAVGTDALALLHLDDRAVEVNVTPD
RGYAFSIRGIAREYAHATGAAFTDPADALALLAADAPVQGVEVRVDDAAPIRGRAGADVF
VTRVVSGLDVSRPTPTWMVSRLTLAGVRSIALVVDITNYVMLELGQPLHGYDLDRLQGGI
VVRRAAEGETLVTLDGRERALHSEDLVIADGSGPVGLAGVMGGAATEIGAGTSRVLIEAA
GFDPVSIARTARRHKLPSEASKRFERGVDPRIAPAAAARAVQLLEELAGGHAEGLGSILD
TTAPREAIELPLGYPASLVGVDYTEDEVRHALVDVGCALEERDGVLVVTPPTWRPDLRHR
ADLVEEVARIVGYDRIPAVLPVAPPGRGLTAAQRLRRQASIALAASGLSEVMGSPFASEQ
QNARFGAADRDDAPAVRLANPLDVAFPYLRRSLLPGLVDIARRNLSRGSTDLAIFETGTV
FLPRAGVAYGSPEMPPGAARPDADTLRALDAGIPPQPRHVGVLILGDAVPKQPGTPAQRA
GLVDALDSVRQLAHAVGVEIRFEQGSHIALHPGRTAAVEAVTADGPVIVGFAGELLPALA
AELDLPERVALAEVDLDRLVELAGGAVEVRTLTSMPVATQDLSLVVPLEVPAGELLRTVV
EGAGELLESARLVDDYRGPGVEDGTRSLTFALRFRAPDRTLTAAEASEARDGSVRSAAER
FGASLRE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatcccgatcagctggctcggcgagcacgtcgagctccccgcgggggtcaccccc
gaggacgtccacgcctccctcgtgaaggtcggcctcgaggaggaggacgtgcacgcgttc
tcgatctccggtcccgtcgtcgtcgggcaggtgctcgaggcgagccccgagccgcagaca
aacggcaagaccatcaactggtgccaggtgcgcgtcgcccccgagggcgccacggcggcc
gacggcggagaggacgtgcgcggcatcgtctgcggcgcgcacaacttcgtcgtgggcgac
aaggtcgtggtgagcctgcccggcgcggtgctccccggcccgttccccatctcctcccgg
aagacgtacgggcacgtgtccgacggcatgatcgcgtcgtcgcgcgagctcggcctcggg
gaggagcacgacgggatcctcgtgctctcctcgctcggcctcgaccccgcggtcggcacg
gacgccctcgcgctcctccacctcgacgaccgggcggtggaggtcaacgtcacgcccgac
cgcggctacgcgttctcgatccgcggcatcgcccgcgagtacgcgcacgccacgggggcg
gccttcaccgaccccgccgacgcgctcgcgctgctcgcggccgacgcgcccgtccagggc
gtcgaggtgcgcgtcgacgacgccgcccctatccgcggccgcgccggcgccgacgtgttc
gtcacgcgcgtggtctcgggcctcgacgtgtcccggcccacgccgacgtggatggtgtcg
cgcctcaccctcgcgggcgtccgctccatcgcgctcgtggtcgacatcaccaactacgtg
atgctcgagctcggccagcccctgcacgggtacgacctcgaccggctgcagggcggcatc
gtcgtccgccgcgcggccgagggcgagacgctcgtcacactcgacgggcgcgagcgcgcg
ctgcactccgaggacctcgtcatcgccgacggctccggcccggtcgggctggcgggcgtc
atgggcggcgcggccaccgagatcggcgcgggcaccagccgcgtgctgatcgaggcggcc
ggcttcgaccccgtgtcgatcgcccgcacggcccgcaggcacaagctgccgagcgaggcg
tccaagcgcttcgagcggggagtggatccgcgcatcgctcccgccgccgcggcgcgcgcg
gtgcagctcctcgaggagctcgccggcggtcacgcggagggactcggctcgatcctcgac
acgaccgcgccgcgcgaggcgatcgagctgcccctcggctaccccgcgtcgctcgtcggc
gtcgactacaccgaggacgaggtgcgccacgcgctcgtcgacgtgggctgcgcgctcgag
gagcgcgacggcgtgctcgtcgtcaccccgccgacctggcgacccgacctccgccaccgc
gccgacctcgtggaggaggtcgcccgcatcgtcggctacgaccggatccccgccgtgctg
cccgtcgcgcccccgggccgcggcctcaccgccgcgcagcggctccgacgccaggcctcg
atcgcgctcgccgcgtccgggctcagcgaggtcatggggtcgccgttcgcctccgagcag
cagaacgcccgcttcggcgcggccgaccgcgacgacgcgcccgcggtgcgcctcgcgaac
ccgctcgacgtcgcgttcccgtacctccgccgctccctcctgccggggctcgtcgacatc
gcccggcgcaacctgtcgcgcggatccaccgacctcgcgatcttcgagaccggcaccgtg
ttcctgccccgcgcgggagtcgcgtacggctcgcccgagatgccgcccggagccgcgcgc
cccgacgcggacacgctgcgggcgctggatgcgggcatcccgccgcagccgcgccacgtc
ggcgtgctgatcctcggggacgccgtgccgaagcagccgggtaccccggcgcagcgcgcg
ggcctcgtcgacgcgctcgactccgtgcggcagctggcgcacgccgtgggcgtggagatc
cgcttcgagcagggcagccacatcgccctgcatcccggacgcacggccgcggtcgaggcc
gtgacggccgacggccccgtcatcgtgggcttcgccggcgagctcctgcccgcgctcgcc
gccgagctcgacctgcccgagcgcgtcgcgctcgccgaggtcgacctcgaccggctcgtc
gagctggcgggcggcgcggtcgaggtgcgcacgctcacctcgatgcccgtcgccacgcag
gacctcagcctcgtggtgccgctcgaggtcccggcgggggagctgctccgcacggtggtc
gagggcgcgggcgagctgctcgagtccgcccggctcgtggacgactaccgcggtcccggc
gtcgaggacggcacgcgctcgctcacgttcgcgctccgcttccgggcgcccgaccgcacg
ctgactgcggccgaggcgagcgaggcccgcgacggatccgtgcggtcggccgccgagcgg
ttcggcgcgtcgctccgggagtag
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