Clavibacter californiensis: FGD68_12625
Help
Entry
FGD68_12625 CDS
T08592
Symbol
thyX
Name
(GenBank) FAD-dependent thymidylate synthase
KO
K03465
thymidylate synthase (FAD) [EC:
2.1.1.148
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00240
Pyrimidine metabolism
ccaf00670
One carbon pool by folate
ccaf01100
Metabolic pathways
ccaf01232
Nucleotide metabolism
Module
ccaf_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FGD68_12625 (thyX)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FGD68_12625 (thyX)
Enzymes [BR:
ccaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.148 thymidylate synthase (FAD)
FGD68_12625 (thyX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thy1
Motif
Other DBs
NCBI-ProteinID:
UKF79625
LinkDB
All DBs
Position
complement(2619304..2620095)
Genome browser
AA seq
263 aa
AA seq
DB search
MTVVPHDDIAFRSDMTVELVRSSAHDSDVIFAARVSTAGEKTLERALDEPDGQDRALEGD
VDTEAEEKRVKRDRGLINYLMRDRHGSPFEHNSMTFYVQAPIFVFREFMRHRMASYNEES
GRYKELDAVFYVPGPERNLVQVGKPGAYEFHAGTPEQTALVQEETRRTSAEAYASYRRML
EQGVAREVARIVLPLNIYSSMYVTLNARALMNFLSLRTKHEDSTFPSFPQREIEMCAEKM
ETEFERLMPLTHAAFQKNGRVAP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcgtgccccacgacgacatcgccttccgctccgacatgaccgtggagctcgtc
cgctccagcgcccacgactccgacgtgatcttcgccgcccgcgtctccaccgcaggcgag
aagaccctcgagcgcgcgctcgacgagcccgacggccaggaccgcgccctcgagggcgac
gtcgacaccgaggcggaggagaagcgcgtcaagcgcgaccgcggcctcatcaactacctc
atgcgcgaccgccacggatcgccattcgagcacaactcgatgaccttctacgttcaggcg
ccgatcttcgtgttccgcgagttcatgcgccaccgcatggcctcctacaacgaggagtcg
ggccgctacaaggagctcgacgcggtgttctacgtccccggccccgagcgcaacctcgtg
caggtcggcaagcccggcgcctacgagttccacgcgggcacccccgagcagaccgcgctc
gtgcaggaggagacccgtcgcacgtccgccgaggcgtacgcctcctaccggcggatgctc
gagcagggcgtggcgcgcgaggtcgcccgcatcgtcctcccgctgaacatctactcctcg
atgtacgtcacgctcaacgcgcgcgcgctgatgaacttcctgtcgctgcgcaccaagcac
gaggactcgacgttcccgagcttcccgcagcgcgagatcgagatgtgcgccgagaagatg
gagaccgagttcgagcggctcatgcccctgacgcacgccgcgttccagaagaacggccgc
gtcgccccgtag
DBGET
integrated database retrieval system
