Clavibacter californiensis: FGD68_13315
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Entry
FGD68_13315 CDS
T08592
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FGD68_13315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
UKF79757
LinkDB
All DBs
Position
complement(2770823..2776855)
Genome browser
AA seq
2010 aa
AA seq
DB search
MRGAPAMIREWIRRHRQAAATVTGGAVVLALLTGFALVSDGYQAQRVDLDDGSVWVVNSA
QQAIGRANTAVLELDSVVESRSEDIDVLQAGSTVLLADRGSSRLDVVDDATSEVVDTAPL
PAGAEVMLAGSRAAILVPATGQLWLVPVAGLSAFDAASAPTLILGADAVASMGDDGTLLV
YSAATGTLSRIQAATEDTVRETVDVGPVGAPVAAAADAPADPAAALAGETVQAGDAGRPA
GQRLALTSIDGHWALYDADARALLVDGRTVDLAGSVAADARVALQRASSDGSGVLVAHSG
GLVEVPVAGGDPVVVTGDVRGDPARPVRVAGCEFAGWTDGSAWQRCLAPATLAGGGDGDQ
DARRTAAGATSGIGSMPQQAALRFVVDGSRVVLNDTRGGAAWAVQGDAGLIDNWADLIDR
DRSDTVVEQNTADTPPETDRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDS
VTPVDAAVGAVVIVDEGQGLQLALAAGASGTVRFSYVVSDGRGGTATADVRVAVRGADEN
SPPEQSRPATGTVAEGDRLQTDVLGGWYDPDGDPMYLTRASVPAPDAVSWKPEGRVVYTD
AGAGGDTRTVALQVSDGREEGAGELVVTVRRAGDVPLVAEAFVVQAAIGREITVEPLTHA
RGGSGAIRLAAVPARAGVQITPDLEAGTFRLQGGQAGTHLLEYTVTDGRTTATGVVRVEV
RGAPASDGRPVTVPHTVFVRALQAQDVDVLQTDFDPAGGVLVITDAVSPGDAVGVRAEVV
GQRLVRISLTRPLDGPVDVEYRVSNGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVG
DAVDIPVLANDQQPDGDRLRLDPVLVDPLPDGAGLLFASEDRLRYLAPGRTGDYTAVYRA
VAPDGQWATATLTVSVREADVATNAEPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRL
LGQDTGPEKGQVVEVGPDWIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISPRVEG
ARNPVATADTVTVRPGRVLRVQVLANDTDPDGGALSLVSVQPQAEGVVAGLDGDTVRVVA
PEAAGRYGFVYGVRNARGGSDEAFLTVIVDPAAPPTRPVARDTVLQLSDVLDRSSVDVDV
MRNVFSAEGDASSLVLAVGAGYEDVARVTDDGRIRVEVGDERRIVPFTVTQPDDPTISTT
AFVWVPGFEDTLPQLRVGEPRPTVPSGERLVVDLDEQVVAAGGRAVRIADPNSLSATHAA
GPVELVDEDTIAYQSEPGYFGPAAISFTVTDGSGAGGRTAALVLPITVTPTENQPPVFTG
AVIDLEPGQSKDVDLGRLTTYPYQDDRGQLAFALEGSVAAGFRASVDGGTLRISADEGVA
TGQAASFPVSVRDATQTGRAGRIDLRVVPSTRPLAQPATDEGTVTRGSSTTVDVLANDQA
GNPFPGTPLTVASIRGADGASLPAGVTVTPSADRATLSVSASADAEPGDVRVQYEVRDAT
GDAGRAAFGTVVIHVQDRPGPVTALRASGFADRSLTVAFEPGAFNGSAITGYQLRVLRGG
TATATVTCPSTTCTVPTPGNGPANSVQVEVSAVNGVGTSDPVSIAGLWSDVLPPAPAGLA
VEPLVDGLRLSWQPSAVPSSSSPVTQYVVGVGGLTRQVPADATSVEVRDPSLVAEVPVAV
SVAARNSAQVQDGTAWLTATATGTPRGAPTATGAPTAVADATDETRVTVSWPAFQGQGVD
GIRYLVAAYAPGSAPGCTVPTEGVSPWSAQHGPAVEVGGATSHVFTGLATDQPVAFAVLA
ANSQGCTVVEAGQLTPRTAPSTPVVRVDLPSPDRSADGVFRAVLADARYRPGSASASAQL
LYRVDGQGDGVPIGVGQALTLPRTGVGASIQVRVVEDSGDGRPRSSGWSDPVPAGTAVDA
RAGDVRSATDDAGVTTFSWTSMPPAAGRGARVSDAGGYARSEWRCGGQGAWTDASSGAAG
SCAVPAGGERILEVRVTANSGTLYTYAHRG
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggagctcccgcgatgatccgcgagtggatccgccgccaccgccaggccgctgcg
accgtcaccggcggggccgtcgtgctcgccctcctcacgggcttcgcgctcgtctcggac
ggctaccaggcgcagcgcgtcgacctcgacgacggatccgtgtgggtcgtcaactccgcg
cagcaggcgatcggccgcgccaacacggccgtgctcgagctcgacagcgtcgtcgagtcc
cgcagcgaggacatcgacgtgctgcaggccggatccaccgtgctgctcgccgaccgcggc
agctcgcggctcgacgtggtcgacgacgcgacgagcgaggtggtcgacaccgcaccgctg
cccgcgggcgccgaggtcatgctcgcgggatcgcgcgccgcgatcctcgtgccggcgacg
ggccagctgtggctcgtgccggtcgccggcctctccgcgttcgacgccgcgagcgcgccc
acgctcatcctcggggccgacgccgtcgcgtccatgggtgacgacggcacgctgctcgtg
tactcggccgcgacggggacgctgtcgcgcatccaggccgcgaccgaggacaccgtgcgg
gagacggtcgacgtcgggcccgtcggcgcgcccgtggccgcggcggccgacgcccccgcc
gatcccgcggcggccctcgcgggcgagaccgtccaggccggggatgccggccggcccgcc
ggccagcgcctcgcgctcacgtccatcgacggccactgggcgctgtacgacgccgacgcg
cgcgccctcctcgtcgacgggcggacggtcgacctcgccggatccgtggccgcggacgcg
cgcgtcgccctccagcgcgcgtcgtcggacggcagcggcgtcctggtcgcgcactcgggc
gggctcgtcgaggtgcccgtcgcgggcggggatccggtcgtcgtgacaggcgacgtgcgc
ggcgaccccgcgcgtcccgtccgcgtggccggctgcgagttcgcgggctggaccgatgga
tccgcgtggcagcgctgcctcgcgcccgcgaccctcgcgggtgggggcgacggcgaccag
gacgcccggcgcacggcggcgggcgccacgagcggcatcggatccatgccgcagcaggcc
gccctgcgcttcgtggtcgacggatcgcgcgtggtgctcaacgacacccgcggcggcgcc
gcgtgggccgtgcagggcgacgcgggactcatcgacaactgggccgacctcatcgaccgc
gaccgctccgacacggtcgtcgagcagaacaccgcggacaccccgcccgagaccgaccgc
gtgcagcagccgcccgtcgcggtcgacgacgacctcggcgcgcgccccggccgcaccacc
gcgctgcccgttctcctcaacgaccacgacccgaacggcgacgtgctcgtgatcgactcc
gtcacgcccgtggacgcggcggtcggcgcggtcgtcatcgtggacgagggccagggcctc
cagctcgcgctcgccgcgggcgcgtccggcaccgtgcggttctcctacgtcgtgagcgac
gggcgcggcggcaccgcgacggccgacgtgcgcgtcgccgtgcggggggccgacgagaac
tcgccgcccgagcagtcgcggcccgcgacgggcacggtcgcggagggcgaccggctgcag
accgacgtgctgggcggctggtacgaccccgacggggatccgatgtacctcacgcgcgcg
agcgtccccgcgcccgacgccgtcagctggaagcccgaggggcgcgtcgtctacacggac
gccggggcgggcggcgacacgcggaccgtcgcgctgcaggtgtccgacgggcgcgaggag
ggggcgggcgagctggtcgtcaccgtgcgccgcgccggggacgtgccgctcgtggccgag
gccttcgtcgtgcaggcggcgatcgggcgcgagatcacggtcgagccgctgacgcacgcg
cgcggcgggagcggcgcgatccggctggcggccgtgcccgcgcgggccggcgtgcagatc
acgcccgacctcgaggccggcaccttccgcctccagggcggccaggcgggcacgcacctg
ctcgagtacacggtgaccgacgggcggacgacggccacgggcgtcgtgcgcgtcgaggtg
cgcggcgcgcccgcgtcggacggccggcccgtgaccgtgccgcacaccgtgttcgtgcgc
gcgctccaggcgcaggacgtggacgtgctccagaccgacttcgaccccgcgggcggggtg
ctcgtgatcaccgacgccgtctcgcccggcgacgccgtgggcgtgcgcgccgaggtcgtc
gggcagcggctcgtgcggatcagcctcacccggccgctcgacggtccggtggacgtggag
taccgcgtgagcaacggcgtggccgaggcgaccggcgtgatcaccgtgatcgaggtgccc
gagccggccgtgcgccagccgcccgtcgcgaccgacgaccgcgtggctgtgcgcgtgggc
gacgcggtggacatccccgtgctcgccaacgaccagcagcccgacggcgaccggctccgc
ctcgaccccgtgctcgtggatccgctgcccgacggcgccggcctcctcttcgcgagcgag
gaccgcctccgctacctcgcgcccggccgcacgggcgactacaccgccgtctaccgcgcc
gtcgcgcccgacgggcagtgggcgaccgcgacgctcaccgtctccgtgcgcgaggccgac
gtcgcgaccaacgccgagcccgtgccgcgcccgctcacggcgcgcgtgctcgcgggggag
accgtgcggatccccgtgccgctcaccggcatcgaccccgacggcgactcggtgcggctc
ctcgggcaggacaccgggcccgagaagggccaggtcgtcgaggtggggccggactggatc
gactaccaggcgggcgactactccaccggcaccgacgcgttcgcgtacgccgtggtcgac
gggctgggcgcgcgggcgaccggcacgatccgcgtgggcatcagcccgcgcgtcgagggc
gcgaggaaccccgtcgccaccgccgacaccgtgaccgtgcggccgggccgcgtgctccgc
gtgcaggtgctggccaacgacacggatccggacggcggcgcgctctcgctcgtctcggtg
cagccgcaggcggagggcgtcgtcgcggggctcgacggcgacaccgtgcgcgtcgtcgcg
cccgaggccgccggccgctacggcttcgtgtacggcgtgcgcaacgcgcgcggcggcagc
gacgaggcgttcctcaccgtgatcgtggatcccgccgcgccgcccacccgcccggtcgcg
cgcgacacggtgctccagctctccgacgtgctcgaccgctcgtccgtcgacgtcgacgtc
atgcgcaacgtgttctccgcggagggcgacgcgtcgtcgctcgtgctcgccgtcggcgcc
ggctacgaggacgtcgcgcgggtgacggacgacggccggatccgcgtcgaggtcggcgac
gagcgccgcatcgtcccgttcacggtgacgcagcccgacgacccgaccatctccacgacg
gccttcgtctgggtgcccggcttcgaggacaccctgccgcagctgcgcgtgggcgagccg
cggccgaccgtgccgagcggcgagcggctcgtggtcgacctcgacgagcaggtggtcgcg
gcgggcggccgggccgtgcgcatcgcggatccgaactcgctgtcggcgacgcacgccgcc
gggcccgtcgagctcgtggacgaggacaccatcgcgtaccagagcgagcccgggtacttc
gggccggcggcgatctccttcaccgtgaccgacgggtcgggcgcgggcgggcgcacggcc
gcgctcgtgctgccgatcaccgtgacgcccaccgagaaccagccgcccgtgttcacgggc
gcggtcatcgacctcgagcccgggcagtccaaggacgtcgacctcggccgcctcaccacc
tatccgtaccaggacgaccgcgggcagctcgccttcgcgctggagggatccgtcgccgcc
gggttccgcgcgtccgtcgacggcggcacgctccgcatctccgccgacgagggcgtcgcg
acggggcaggccgcgtcgttcccggtgagcgtccgcgacgccacgcagaccgggcgcgcg
ggccgcatcgacctccgcgtcgtgccgtcgacgcgcccgctcgcgcagcccgcgacggac
gagggcaccgtgacccgcggatcctccaccaccgtcgacgtgctcgccaacgaccaggca
ggcaaccccttcccgggcacgccgctcacggtcgcgtccatccgcggcgccgacggcgcg
agcctccccgcgggcgtgaccgtgacgccgtcggctgaccgcgcgacgctctccgtgagc
gcatcagccgacgccgagcccggcgacgtgcgcgtgcagtacgaggtgcgcgacgccacg
ggcgacgccggccgggcagcgttcggcaccgtcgtgatccacgtgcaggaccgcccggga
cccgtcacggccctgcgggcctccggcttcgcggaccgctcgctcaccgtcgcgttcgag
ccgggcgcattcaacggatccgccatcacgggctaccagctgcgcgtgctccgcggcggc
acggcgaccgcgaccgtcacctgcccgtcgacgacctgcaccgtgccgacccccggcaac
gggcccgccaactcggtgcaggtggaggtctccgccgtgaacggcgtgggcacctccgac
cccgtctcgatcgcgggcctctggtcggacgtgctcccgcccgcgcccgcgggcctcgcc
gtcgagccgctcgtcgacgggctgcgcctctcgtggcagccgtcggccgtgccgtcgtcg
tcgagccccgtcacgcagtacgtcgtgggggtgggcggcctcacccggcaggtcccggcc
gacgccacgagcgtcgaggtgcgggatccgtcgctcgtcgccgaggtgcccgtcgccgtc
tcggtggccgcgcgcaacagcgcgcaggtgcaggacgggaccgcgtggctcaccgccacc
gcgacgggcacgccgcgcggcgccccgaccgccaccggcgcgcccaccgcggtcgccgac
gcgaccgacgagacgcgcgtgaccgtctcgtggccggcgttccagggccagggagtcgac
gggatccgctacctcgtcgccgcgtacgccccgggatccgcgcccggctgcacggtgccc
accgagggcgtgtcgccgtggtcggcccagcacggtcccgcggtcgaggtgggcggcgcg
accagccacgtcttcacgggcctcgccaccgaccagcccgtcgcgttcgccgtgctcgcc
gccaacagccagggctgcacggtcgtcgaggccgggcagctcaccccgcgcacggcgccg
tccacgcccgtcgtccgcgtcgacctgccgagcccggaccggtccgccgacggcgtcttc
cgcgcggtcctcgccgacgcccgctaccggcccggcagcgcgtccgcgtccgcccagctg
ctgtaccgggtcgacgggcagggcgacggcgtgccgatcggcgtcggccaggcgctcacg
ctgccgcgcacgggcgtcggcgcctcgatccaggtgcgcgtcgtcgaggactcgggcgac
gggcgaccgcggtcgagcggctggtcggatcccgtccccgccggcaccgccgtggacgcg
cgcgcgggcgacgtgcggtccgccaccgacgatgcgggagtcacgacgttctcgtggacc
tcgatgccgccggccgccggacgcggcgcgcgcgtctcggacgccggcgggtacgcgcgc
agcgagtggcgctgcggcggccagggcgcgtggaccgacgcgtcgtcgggcgcggccgga
tcctgcgcggtcccggccggcggcgagcggatcctcgaggtgcgcgtcaccgcgaactcg
ggcaccctgtacacgtacgcccaccgcggatga
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