Clavibacter californiensis: FGD68_14215
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Entry
FGD68_14215 CDS
T08592
Symbol
prpB
Name
(GenBank) methylisocitrate lyase
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00640
Propanoate metabolism
ccaf01100
Metabolic pathways
ccaf01120
Microbial metabolism in diverse environments
ccaf01200
Carbon metabolism
Module
ccaf_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FGD68_14215 (prpB)
Enzymes [BR:
ccaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
FGD68_14215 (prpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
S-methyl_trans
Motif
Other DBs
NCBI-ProteinID:
UKF79925
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All DBs
Position
complement(2962122..2963036)
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AA seq
304 aa
AA seq
DB search
MLHSTLTSAAKRRAFRERLASGELLRMPGAFNPLSARLIQDKGMDGVYISGAVLSADLGL
PDIGLTTLTEVAGRSQQIARVTDLPCLVDADTGFGEPMNVARTVQMLEDAGVAGLHIEDQ
VNPKRCGHLDGKQVVDESTALKRIRAAVDARRDPDLLVMARTDVRGVDGMAAAVDRARAL
VDAGADAIFPEAMADLAEFEAMRQAVDVPILANMTEFGKSELFTTQQLADVGVNIVIYPV
SLLRLAMGAAERGLDAILEEGTLAGQVPEMQTRARLYELLDYAGYSAFDEDVFTFTLEGN
RGGA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcattccaccctcacctcggccgccaagcgccgcgcgttccgcgagcggctcgcg
tcaggtgagctgctccggatgcccggtgcgttcaacccgctctcggcccgcctcatccag
gacaagggcatggacggcgtctacatctccggcgccgtgctctcggcggacctcggcctc
ccggacatcggcctcacgacgctcaccgaggtggccgggcgctcgcagcagatcgcgcgc
gtcaccgacctgccgtgcctcgtcgacgcggacacgggcttcggcgagccgatgaacgtc
gcgcgcaccgtgcagatgctggaggacgccggcgtcgcgggcctccacatcgaggaccag
gtgaaccccaagcgctgcggccacctcgacggcaagcaggtggtggacgagtcgacggcg
ctgaagcggatccgcgcggccgtcgacgcccgccgcgaccccgacctgctggtcatggcc
cgcaccgacgtgcgcggagtggacggcatggccgcggcggtcgaccgggcgcgcgcgctc
gtggacgcgggcgccgatgcgatcttccccgaggcgatggcggacctcgccgagttcgag
gcgatgcgccaggcggtggacgtgccgatcctcgccaacatgaccgagttcgggaagagc
gagctgttcacgacgcagcagctcgcggacgtgggcgtgaacatcgtcatctacccggtg
tcgctcctgcgcctcgcgatgggcgccgctgagcgcggcctcgacgcgatcctcgaggag
ggcacgctcgccggccaggtgcccgagatgcagacgcgcgcccgcctctacgagctgctc
gactacgcgggctacagcgcgttcgacgaggacgtcttcaccttcacgctggaggggaac
cgcggcggggcgtga
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integrated database retrieval system
