Clavibacter californiensis: FGD68_14400
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Entry
FGD68_14400 CDS
T08592
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00061
Fatty acid biosynthesis
ccaf00071
Fatty acid degradation
ccaf01100
Metabolic pathways
ccaf01212
Fatty acid metabolism
ccaf02024
Quorum sensing
ccaf04146
Peroxisome
Module
ccaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FGD68_14400
00071 Fatty acid degradation
FGD68_14400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FGD68_14400
09145 Cellular community - prokaryotes
02024 Quorum sensing
FGD68_14400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccaf01004
]
FGD68_14400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaf04147
]
FGD68_14400
Enzymes [BR:
ccaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FGD68_14400
Lipid biosynthesis proteins [BR:
ccaf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FGD68_14400
Exosome [BR:
ccaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
FGD68_14400
Exosomal proteins of breast cancer cells
FGD68_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UKF79957
LinkDB
All DBs
Position
complement(2999500..3001086)
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AA seq
528 aa
AA seq
DB search
MSSDTPLLADDHPTTTGFASVSVAAILAESAERHADRVAVVVGDVPTTYRELWDQTRAYA
GALAARGVGEGTRVAMLIPNVADFPRVYYAVLALGGVVVPVHALLKSEEIAYVLRDSGSA
LLVCAGPLLEQGAKGAALAEVPVISVLVPAATEGGPDRLEELAQAATPIRTYVPRRPSDT
ATILYTSGTTGQPKGAEGSHLALVMQVDVLILDTFDLRAGDRILGCLPLFHTFGQTCTMN
ASFRAGATIVMVPRFDGDTALALMVEHETQVFMGVPTMYFALLAAAARNPARPVLRYAIS
GGAAIPVAVIDAFREQFDAEIHEGYGLTETSPVASFNHVGVPARPGTVGKPIWGVQIEIA
DPEHEDRVELVERGVLGEIVIRGHNLMNGYLHRPEDTARAVVNGWFRSGDLGTIDEDGYI
RVVDRTKDMILRNGYNVYPREVEEVLARHEAVAQCAVFGVPHEEHGQEIVAAIVPKADAT
VDAAEVVAYMKERIASYKYPRRVEVVEALPLGPSGKILKRALVERFGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacacgcccctcctcgccgacgaccacccgacgaccaccgggttcgcctcg
gtctcggtcgccgcgatcctcgccgagtcggctgagcggcacgccgatcgcgtcgccgtg
gtcgtcggcgacgtccccaccacctaccgcgagctctgggaccagacgcgcgcctacgcg
ggcgccctcgccgcgcgcggtgtgggggagggcacgcgcgtcgcgatgctcatcccgaac
gtcgccgacttcccgcgcgtgtactacgcggtgctcgcgctcggcggcgtggtcgtgccc
gtgcatgcgctgctgaagagcgaggagatcgcgtacgtgctgcgcgactccggatccgcc
ctcctcgtctgcgccggccctctgctcgagcagggcgcgaagggcgcggcgctcgccgag
gtgccggtgatcagcgtgctcgtgccggccgccaccgagggcgggcccgaccggctggag
gagctcgcgcaggccgcgacgcccatccgcacctacgtgccgcgtcggccgtccgacacc
gcgacgatcctctacacgtccggcaccaccggccagccgaagggcgcggagggcagccac
ctcgcgctcgtgatgcaggtcgacgtgctcatcctcgacaccttcgacctgcgcgccggc
gaccggatcctcggctgcctgcccctgttccacaccttcgggcagacctgcaccatgaac
gcgtcgttccgggcgggcgccacgatcgtgatggtgccgcgcttcgacggcgacaccgcc
ctcgcgctcatggtcgagcacgagacgcaggtgttcatgggcgtgcccaccatgtacttc
gccctgctcgcggccgccgccaggaaccccgcgcgcccggtcctccgctacgccatctcg
ggcggcgccgcgatccccgtggccgtcatcgacgcgttccgcgagcagttcgacgccgag
atccacgagggctacggcctcaccgagacctcgcccgtcgcgtcgttcaaccacgtcggc
gtaccggcgcggcccggcaccgtcgggaagccgatctggggcgtgcagatcgagatcgcc
gaccccgagcacgaggaccgcgtggagctcgtggagcggggcgtgctcggcgagatcgtg
atccgcggccacaacctcatgaacggctacctgcaccgccccgaggacacggcccgcgcg
gtcgtcaacggctggttccgctccggtgacctcggcaccatcgacgaggacggctacatc
cgcgtggtcgaccggacgaaggacatgatcctgcgcaacggctacaacgtgtacccgcgc
gaggtcgaggaggtgctcgcccggcacgaggccgtcgcgcagtgcgccgtgttcggcgtg
ccgcacgaggagcacgggcaggagatcgtcgcggcgatcgtgccgaaggcggacgccacg
gtcgacgcggcggaggtcgtcgcgtacatgaaggagcgcatcgcctcctacaagtacccg
cggcgggtcgaggtggtcgaggcgctgccgctcgggccgagcggcaagatcctcaagcgg
gcgctcgtcgagcggttcggcgcgtga
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