Clavibacter californiensis: FGD68_14675
Help
Entry
FGD68_14675 CDS
T08592
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGD68_14675 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaf03019
]
FGD68_14675 (groL)
03110 Chaperones and folding catalysts [BR:
ccaf03110
]
FGD68_14675 (groL)
03029 Mitochondrial biogenesis [BR:
ccaf03029
]
FGD68_14675 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaf04147
]
FGD68_14675 (groL)
Enzymes [BR:
ccaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FGD68_14675 (groL)
Messenger RNA biogenesis [BR:
ccaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FGD68_14675 (groL)
Chaperones and folding catalysts [BR:
ccaf03110
]
Heat shock proteins
HSP60 / Chaperonin
FGD68_14675 (groL)
Mitochondrial biogenesis [BR:
ccaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FGD68_14675 (groL)
Exosome [BR:
ccaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FGD68_14675 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FGD68_14675 (groL)
Exosomal proteins of breast cancer cells
FGD68_14675 (groL)
Exosomal proteins of colorectal cancer cells
FGD68_14675 (groL)
Exosomal proteins of bladder cancer cells
FGD68_14675 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
bHLH_NPAS4
Motif
Other DBs
NCBI-ProteinID:
UKF80005
LinkDB
All DBs
Position
complement(3061843..3063462)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVTEELKAAAKEIETKEEIAATASISAGDSTIGAIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPERQEAVFEDAYILIVNSKISNIKDLLPIVDKVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIA
EEVGLKLENVTLDLLGTARKVVITKDETTIVEGGGDATEIAARVQQIRNEIGNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLQLEGDEATGANIVRVAVDAPLKQIALNAGLEPGVVAERVRNLPSGHGLNAAT
GEYVDMLAAGINDPVKVTRSALLNAASIAGLFLTTEAVVADKPEKNPAPAGDPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatcatcgcttttgacgaagaagcccgccgcggcctcgagcgcggcctgaac
atcctggccgacgcggtccgcgtgacgctcggcccgcgtggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcacgaacgacggcgtgtccatcgccaaggagatcgag
ctcgacgacccgttcgagaagatcggcgcggagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgaccaccgcgaccgtcctcgcgcaggcgctggtccgc
gagggcctccgcaacgtcgccgcgggcgccgaccccatcagcctcaagcgcggcatcgag
aaggccgtcgcggccgtcacggaggagctcaaggccgccgcgaaggagatcgagaccaag
gaggagatcgccgccaccgcgtccatctccgccggcgactccaccatcggcgccatcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtcgtcaccgtcgaggagtccaacacc
ttcggcaccgagctcgagctcaccgagggcatgcgcttcgacaagggctacctgtcgcag
tacttcgtcacggaccccgagcgccaggaggccgtgttcgaggacgcgtacatcctgatc
gtcaactcgaagatctcgaacatcaaggacctcctgcccatcgtcgacaaggtcatccag
tcgggcaagcagctcctcatcatcgccgaggacgtcgacggcgaggccctggccacgctc
gtcgtgaacaagatccgcggcatcttcaagtcggtcgccgtcaaggcccccggcttcggc
gaccgtcgcaaggcgcagctgcaggacatcgccatcctcaccggtggccaggtcatcgcc
gaggaggtcggcctcaagctcgagaacgtcaccctcgacctgctcggcacggcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgagggcggcggagacgccaccgagatc
gcggcccgcgtgcagcagatccgcaacgagatcggcaacacggacagcgactacgaccgc
gagaagctccaggagcgcctcgcgaagctggccggcggcgtggccgtcatcaaggccggc
gccgcgaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtcgccctcatccaggcc
ggcaagctcgcgttcgagaagctccagctcgagggcgacgaggcgacgggcgcgaacatc
gtccgcgtcgcggtcgacgctccgctcaagcagatcgccctcaacgcgggcctcgagccc
ggcgtcgtggccgagcgcgtccgcaacctcccttcgggtcacggcctcaacgccgccacg
ggcgagtacgtcgacatgctcgccgcggggatcaacgacccggtgaaggtcacgcgctcg
gctctgctgaacgccgcgtccatcgccggtctgttcctcacgaccgaggcggtcgtcgcc
gacaagcccgagaagaacccggccccggccggcgaccccacgggtggcatggacttctag
DBGET
integrated database retrieval system
