Clavibacter californiensis: FGD68_15160
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Entry
FGD68_15160 CDS
T08592
Name
(GenBank) relaxase domain-containing protein
Organism
ccaf
Clavibacter californiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
TraI_hel_assoc_N
AAA_22
AAA_11
Viral_helicase1
PhoH
UvrD_C_2
AAA_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
UKF81723
LinkDB
All DBs
Position
pCCa:complement(11560..15984)
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AA seq
1474 aa
AA seq
DB search
MTMHILSAGDGYAYYTSEVATGDAKRDRARELGDYYTFDGNPPGRWMGGGAALLGVSGTV
SEEQMKALYGEGLHPDADRIIAEALAEGVSAKEAQQRAKLGRAYYAYRAGPTTLQGRIQA
GYDTFQRLNGHEPDVEERRLIRAREGAQAFRDAKGREPADKEELGNFITAATRPDQTAVA
GFDLVCSPSKSVSVLWALGDTETRNAIEAAQEQAVRDTISYLEREAIATRSGTNGVAQID
VEGGIAATVFRHYDSRNGDPQLHDHVVVANKVKGVDGKWRTIDSKLLHRMNVPASEFYNA
AVMSEVCRRLGVTTTARVPSPGKRPVMEIAGVDPDLIDTFSSRSAAIRTATARLTEEYRR
DHGRAPDAKTLIAIAQQATLETRPQKDHVRSPQAIHEAAVARVGADRAAGLLDAARDLAP
TNKEAASVDVDEVTAQVLRTVEEHHAVWGAHVIEAEARRHLAALIPDQSVAEPLVQKVTR
AALGGSVTLTPPSPHGAFTPLTRSDGSSIYDHKGKTLFTSTRILDAEDQLLDAARTRTVS
PISRDTFERTAAQHTGPLDAGQRDLAREFATSDRELVVGIGPAGAGKTTALRLAATALEE
GGRRMIGLAPSAPAASVIAEAVGIEATTIHGFLTAHAQAELPEKYEIRAGDVLVVDEAGM
AGTQRLAALHTIAREYGAHVRLIGDDRQLSAVEAGGALRLIDREVGSVRLEHVHRFQDAD
EAEASLHLRDPLRPGDPFAWYQANDRVVGGDVDRMTDAVFAGWQTDTDAGLRSLMLAPTG
ATVTELNARAQAHRIAAGTIIGTRAVKLRDDLSAHVGDFVATRRNESLLRIQNGRDRVKN
GDLWQVTRIGADGSLDVVHRDHAAPVTLPAGYVREHVELGYARTISRSQGLTADTSHILG
DESMTRETAYTGLTRGKQSNRLYLEVADGAAVGDALEQIATRSDAMLSAHETIRAEQDRV
DDLVTLIDQHADVAERAGEIRYGRIAEVALGTSLATTLQSQESWGAVAAALRHAEDYGFS
PVDTLRVAYEQRELGTADDVPAVLSWRIERALEKIDAPRRSVMDLPEVDGVAAWIADARL
QDNDLVPEDWREHLRERHHYIDVRLKERGATLAVERPAWTDALGAVPSQPKRMIAWHQLA
AEVDVLRAKYRVDPAELMAIPAALHGNEIADRLQKRLTAMHKASLLLTAEPIALDTRQRY
AAHFATRADTVRATLGRPVAVPAIAAVAAQQAPAVVATTTAVASELASAPTPQASTVETA
PANATSPETAPVATASPATGQEGTTMSDPIDEALEHVGRNAGRVGQTITSEVTRQIQRAA
DEPRRDQQETQRRAPREREQAVREAHRQAGRDQEKAEQTAAREQERADTFTATYRRTQLE
QEREGDAAVEGFPILDGATALSSYGRDKAEAETIDRSAQIEDAVYTSRELEEREMLSAAG
IDPDERSTDSSSKTSWTNQPAAPEISRGDDGVER
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcacatcctctccgcgggggacgggtatgcgtactacacgagcgaggtcgcc
acgggcgatgcgaagcgcgatcgggcccgtgagctcggcgactactacaccttcgacggc
aaccctcccggccgctggatgggcggcggcgcagcgctcctcggggtgtccgggacggtc
tccgaggagcagatgaaggctctctacggtgaggggctgcacccggacgcggaccgcatc
atcgccgaggctctcgccgagggggtgtccgcgaaggaggcgcagcagcgcgcgaagctc
ggccgcgcctactacgcctaccgcgccggacccaccacgctgcagggacggatccaagcc
ggctacgacacgttccagcgcctcaacggccacgagcccgacgtcgaggaacgccgcctc
atccgcgcccgcgagggcgcgcaggcgttccgcgacgccaagggacgggagccggccgac
aaggaggagctcggcaacttcatcaccgcggccacccgccccgaccagaccgcggtcgcc
ggatttgacctcgtgtgctccccctcgaagagcgtctccgtcctctgggcactcggcgac
accgagacccggaatgccatcgaggccgcccaggagcaggccgtgcgcgacaccatcagc
tacctcgagcgcgaggccatcgcgacccgctccggcaccaacggggtcgcgcagattgat
gtggaaggcggcatcgcggcgaccgtgttccggcactacgactcccggaacggggacccg
cagctgcatgaccacgtcgtggtcgcgaacaaggtcaagggcgtcgacgggaagtggcgc
accatcgactccaagctcctgcaccggatgaacgtgccggcgtcggagttctacaacgcc
gccgtgatgtccgaggtgtgccgccggctcggcgtcacgacgaccgctcgggttccctcc
cccggtaagcggccggtgatggagatcgcgggcgtcgacccggacctgatcgacacgttc
tcctcccgctccgccgccatccgcacggcgaccgcgcggctgacggaggagtaccggcgc
gaccatggccgtgcaccggacgcgaagacgctcatcgcgatcgcgcagcaggcgacgttg
gagacgcggccgcagaaggatcacgtccgttccccgcaggccatccacgaggccgccgtc
gcccgcgtcggcgccgaccgcgccgccggcctcctcgacgccgcgcgcgacctcgcgccc
acgaacaaggaggccgcgagcgtcgacgtcgacgaggtcaccgcgcaggtgctccgcacg
gtggaagagcatcacgcggtgtggggtgcgcacgtcatcgaagccgaagcacgccggcac
ctcgccgccctgatccccgaccagagcgtcgcggaacccctcgtgcagaaggtcacccgc
gccgccctgggcggatcggtgaccctcactcccccgtccccgcacggcgcgttcacgccg
ctcacgcggtcggacgggtcgagcatctacgaccacaagggcaagaccctgttcacgtcg
acgcggatcctcgacgccgaagaccagctcctcgacgccgcccggacccgcaccgtctcc
cccatcagccgggacacgttcgagcgcacggccgcccagcacaccggaccgctcgacgcc
ggccaacgggatctcgcgcgcgagtttgcgacgtcggaccgtgagctcgtggtcggcatc
gggcccgccggcgccggcaagacgaccgcgctgcgcctggccgcgaccgcgctcgaggaa
ggtggccgccgcatgatcggcctcgccccttccgcccctgccgcgtccgtgatcgccgaa
gcggtcggcatcgaggcgaccaccatccacgggttcctgaccgcccacgcgcaggcggaa
ctacccgagaagtacgagatccgggccggggacgtcctggtcgtcgacgaggccggcatg
gccggcacccagcgcctcgccgccctgcacaccatcgcccgcgagtacggcgcgcacgtg
cgcctcatcggcgacgaccgccagctctccgccgtcgaggccggcggcgcgctgcgcctg
atcgaccgcgaggtcgggtccgtgcgcctcgagcacgtccaccgcttccaggacgccgac
gaggcagaggcgtccctgcacctgcgcgacccgctgcgccccggcgacccgttcgcctgg
taccaggcgaacgatcgggtcgtcgggggcgacgtcgaccggatgaccgacgctgtattc
gccggctggcagaccgacaccgacgccggtctccgctcgctcatgctcgctcccaccggc
gccaccgtcaccgagctcaacgcccgcgcgcaggcccaccgcatcgccgccggcaccatc
atcggcacccgcgcggtgaagctccgcgacgacctctccgcgcacgtcggcgacttcgtc
gccacccgccgcaacgagtcgctgctgcggatccagaacggccgcgaccgggtcaagaac
ggcgacctctggcaggtcacccgcatcggcgccgacggatccctcgacgtcgtccaccgc
gaccacgccgcgcccgtcacgctccccgccggctatgtgcgcgaacacgtcgagctcggc
tacgcccgcaccatcagccggtcccagggcctcaccgccgacaccagccacatcctgggc
gatgagagcatgacccgcgagaccgcctacaccggactcacccgcggcaagcagtccaac
cgcctctacctcgaggtcgcggacggcgccgccgtcggcgacgcgctcgagcagatcgcc
acccgctccgacgcgatgctctccgcgcacgagaccatccgcgcggagcaggaccgcgtc
gatgacctggtcaccctcatcgaccagcatgccgacgtcgccgagcgcgccggcgagatc
cgttacggccggatcgcggaggtcgccctcgggaccagcctcgccaccaccctgcagtcg
caggagagctggggcgccgtcgcggccgcgctccggcacgccgaggactacgggttcagc
cccgtcgacaccctccgcgtcgcgtacgagcagcgcgagctcggcacggccgacgatgtg
ccggcggtgctgtcctggcgcatcgaacgcgccctcgagaagatcgacgccccgaggcgc
tccgtgatggacctgcccgaagtcgacggcgttgccgcgtggatcgcggacgcccgcctg
caggacaacgacctggtgccggaggactggcgcgagcacctgcgggagcgccaccactac
atcgacgtccgcctcaaggagcgaggcgcgacactcgccgtcgagcgccctgcctggacc
gacgcgctcggcgccgtcccctcgcagcccaagaggatgatcgcctggcaccagctcgcc
gcggaggtcgacgtcctccgcgccaagtaccgcgtcgaccccgcagagctgatggccatc
cccgcagcgctgcacgggaacgagatcgccgaccggctgcagaagcgcctcacggccatg
cacaaggcgtccctgctcctcaccgccgaaccgatcgccctggacacccgccagcggtac
gcggcgcacttcgcgacccgcgccgacaccgtccgcgccaccctcggccgtcccgtcgcc
gtgccggcgatcgcggccgtagccgcgcagcaggctccagctgtcgtggccacgactacg
gccgtggcctcagagctcgcctcggcgcccactccacaggcatccaccgtcgagacagca
cccgcgaatgcgacaagccctgagaccgcccccgtagccacggcttcccccgccaccgga
caggaaggaaccaccatgagcgatcccatcgacgaggccctcgagcacgtcggccggaac
gcgggccgcgtcgggcagaccatcacctcggaggtcacccggcagatccagcgtgccgca
gacgagccgcgccgcgatcagcaggagacgcagcgcagggccccgcgtgagcgtgagcaa
gccgtccgcgaggcgcatcgccaggccggccgtgaccaggagaaggccgagcagaccgct
gcacgggagcaggagcgcgccgacacgttcaccgccacctaccgccgcactcagctcgag
caggagcgcgagggcgacgccgctgtagaaggcttcccaatcttggacggcgcgacggct
ctctcgtcctacggacgagacaaagcggaggcggaaacgatcgaccgtagcgcgcaaatc
gaggacgctgtgtacacgagccgtgaactagaggagcgcgagatgttaagtgctgcaggc
atcgaccccgacgagcggtccaccgacagcagctccaagacctcgtggaccaaccagccg
gcagcaccagagatctcgcgcggtgacgacggcgtggagcgctga
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