Chromohalobacter canadensis: SR908_02505
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Entry
SR908_02505 CDS
T09637
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ccag
Chromohalobacter canadensis
Pathway
ccag03030
DNA replication
ccag03430
Mismatch repair
ccag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR908_02505 (holA)
03430 Mismatch repair
SR908_02505 (holA)
03440 Homologous recombination
SR908_02505 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccag03032
]
SR908_02505 (holA)
03400 DNA repair and recombination proteins [BR:
ccag03400
]
SR908_02505 (holA)
Enzymes [BR:
ccag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR908_02505 (holA)
DNA replication proteins [BR:
ccag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SR908_02505 (holA)
DNA repair and recombination proteins [BR:
ccag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SR908_02505 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WQH09551
LinkDB
All DBs
Position
511357..512415
Genome browser
AA seq
352 aa
AA seq
DB search
MKVFPDKLDEALGKRLQPVYIVAGDEPLIHMEACDAIRAAARQRGVEERDVLHVENGFQW
GRLTESAASMSLFASSKLIELRLGGQSPGQEGAKALDAYARQAKDSDDILLISSARLDRR
AQSSAWFKALDKIGVFVPVWPVDHQRLHFWVRDRASRHGLSMDMDAARLLGERTEGNLLA
ADQELQKLALLNPPNARLDTQAIAGGVEDNARYDVFTLIDACLRGDRVRVSRIVSGLRGE
GIEAPVVLWALTRELRIFLSLAQHLDQGQSLDHACKAQRPPIPDKRRPLYQQALKRMPLK
RLHKLLLFAQRLDLSIKGAAALPVWEGLHDLSLTLAGGRGPLAEMAYSYRIA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttcccgacaagctcgacgaggcgctcggcaagcgcctccagccagtctac
atcgtcgccggcgacgagccgttgatccatatggaggcttgcgacgccatccgcgccgcg
gcacgccagcgaggcgtcgaggaacgcgatgtactccacgtggaaaatggctttcagtgg
ggacgactcacggaatcggcagccagcatgtcgctgttcgcctcgagcaagctcatcgag
ctgcgcctgggcggccaatcaccaggccaagaaggcgccaaggcactcgatgcctacgcc
cgccaggccaaagacagcgacgacatcctgctgatcagcagcgcgcgtctcgaccgacgc
gcgcaatccagcgcctggttcaaagcgctggataagattggcgtgttcgtcccggtctgg
ccggtggatcaccagcgcctgcacttctgggtgcgggatcgcgcgtcgcgccatgggttg
tccatggacatggacgcggcccgcctgctcggtgagcgcaccgagggcaacctgctggcc
gccgaccaggaactgcagaagctggcgctgctcaatccacccaatgcccggctcgatacc
caagccattgccggcggcgtggaggacaacgcacgctacgatgtcttcacactgatcgac
gcctgcctacgtggcgatcgcgtgcgcgtctcgcgcatcgtcagcggcttgcgcggcgaa
ggcatcgaggctccggtggtgctgtgggcattgacgcgtgagctgcgcatcttcttatcg
ctggcgcagcatctcgatcaggggcaaagcctcgatcacgcctgcaaggctcagcgtccg
ccgattcccgacaagcgtcgtccgctttaccagcaggccttgaagcggatgcccctcaag
cggctacacaagctattattgtttgcacagcgcctggacctatccatcaagggcgctgcg
gcattgcccgtctgggaagggcttcacgacctgtcgctcactctggccggtgggcgcggc
cctctggccgagatggcgtattcctatcgcatcgcctag
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