Chromohalobacter canadensis: SR908_03800
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Entry
SR908_03800 CDS
T09637
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccag
Chromohalobacter canadensis
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccag03016
]
SR908_03800
Enzymes [BR:
ccag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SR908_03800
Transfer RNA biogenesis [BR:
ccag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SR908_03800
Prokaryotic type
SR908_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WQH09795
LinkDB
All DBs
Position
complement(788239..789285)
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AA seq
348 aa
AA seq
DB search
MIDMSLWPPDWPRVHGEPLASGDFRMTPEDFLVEEIFDFAPEGQGEHLWLWIEKRDLTTP
EAVKHVARVCGVRPRDVGYSGLKDRIAVTRQWLSVHLPGRDAPDAFATQLSDVGVVVQET
RRHPRKLKRGVHRANHFTLRLSGEIASHPELSRRWQALCADGVPNYFGPQRFGREGRNLV
LAQKAFARGWRKRDDPHGMQLSAARSFLFNEVLAMRLRAQTWRTPRPGDVLALAGTASRF
VADEIDSALHERAARGDVAPTGPLWGRGRLESGAEVAEEEARLAARHEVLMQGLEAAGVR
MDRRTLCVPLDAPSLEHEASNRVTLGFGLPRGAFATSVLRELMHHPLL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatatgtcgctctggccacccgattggccacgtgtccacggcgagccgctggcc
tcgggcgattttcgcatgacgcccgaggacttccttgttgaggaaatattcgatttcgcg
ccggaagggcagggtgaacacctctggctgtggatcgagaagcgcgatctgacgacaccg
gaagccgtcaagcatgtggcgcgagtgtgtggtgtgcgtccgcgtgacgtgggctatagc
ggcctcaaggaccgcatcgcggttacccgccaatggctctcggtgcatctgcccggacgt
gatgcccctgacgcgtttgccacccaactgagcgacgtgggggtcgtggtgcaagagacg
cgacgtcacccacgcaagctcaagcgcggcgtgcaccgcgccaaccattttacgcttcgt
ctgagcggcgagatcgcctcgcatcccgagttatcgcgtcgctggcaggccctatgcgcg
gatggcgtgcccaattacttcggcccgcaacgcttcggccgcgaagggcgcaacctggtg
ctcgctcagaaggcttttgcgcgaggttggcgtaagcgtgacgatccgcatggtatgcag
ctttctgcggcacgtagcttcctgttcaatgaggtgctggccatgcgcctgcgcgcgcag
acctggcgaacgccgcgtccgggcgatgtgctggcgttggcaggtacggccagccgcttt
gtagccgacgagatcgactctgccttgcacgaacgcgctgcgcgtggcgacgtcgcgcct
accggtccgttgtgggggcgcgggcgtttggagagtggcgcagaggtggccgaggaagaa
gcgcggctcgcggcgcgacatgaagtactcatgcaggggctggaagcggccggcgtacgc
atggatcgacgcacgctatgcgtgccgcttgacgcaccgtcgctggagcatgaggcctca
aaccgagtgacgctcggcttcggcttgccgcgcggcgccttcgcgacctcggtattgcgt
gagttgatgcatcacccgttgctgtga
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