Chromohalobacter canadensis: SR908_09545
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Entry
SR908_09545 CDS
T09637
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ccag
Chromohalobacter canadensis
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccag03400
]
SR908_09545 (phrB)
Enzymes [BR:
ccag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SR908_09545 (phrB)
DNA repair and recombination proteins [BR:
ccag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SR908_09545 (phrB)
Prokaryotic type
SR908_09545 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WQH07741
UniProt:
A0ABZ0Y6Q9
LinkDB
All DBs
Position
complement(1991690..1993111)
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AA seq
473 aa
AA seq
DB search
MSDVQLMWFRSDLRTFDNRALHAAAERGPVIAIFLTSLPQWQHHDHGANKVDFWLRGAAA
LREHLAGLNIPLLQRRIATYDEAPAALLELARTHGASALHFNREYPLNERRRDAAVESAF
QANGLAVWGHTDAVAYAPGELLTGKGEPYSVFTPFAKAWHRQLASRRIALVEEPEPQAQL
AIDADPPPSRDLEAMADAPLDPSLWPAGQDEAGDRLERFLRFRGHHYKRQRDFPALPGTS
ELSPYLALGMISHRQCLHAVMSNNEGHLADGDAGLTAWANELVWREFYLHIAASFPDINR
HCPFQSHTKALAWRDDDAGFQAWCEGRTGYPLVDAAMRQLVHCGWMHNRLRMVVAMFLSK
HLLIDWRRGEAFFMRHLIDGDFASNNGGWQWAASTGTDAAPYFRIFNPTTQAERFDPEGR
FIAQWLPELAELPVKSRFFPDESQRRRTGYATPIVDHKAARQRALDAFKSLTT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgtgcaattgatgtggttccgcagcgacctgcgaaccttcgataaccgcgcc
ttgcatgccgccgccgaacgcggaccggtaatcgccattttcttgaccagccttccgcag
tggcaacatcacgaccacggcgccaacaaggtggacttctggctgcgtggcgcagcagcg
cttcgtgagcacctggccggtctcaatatccccttgctgcaacgacgcatcgcgacctac
gacgaggcgcccgcagcactgctcgaactggcgcgcactcacggcgccagcgcgctgcac
ttcaatcgcgaatatcctctcaacgaacgccgccgcgatgcggcagtggaatctgccttc
caggcgaacgggctggcagtatggggccataccgatgccgtcgcctacgcccccggcgag
ctgctcaccggcaagggcgagccatatagcgtgttcacgccgttcgccaaggcttggcat
cgccagttggcgtcacgccgcatcgccttggtggaagaacctgagccccaagcccaactg
gctatcgacgccgacccgccgccttctcgcgatctcgaggcgatggccgacgcgccactc
gacccgagtctgtggcccgcgggacaggacgaagccggcgaccgcctcgaacgcttcctg
cgttttcgcggccatcattacaagcgccagcgagatttccccgcactccccggcaccagc
gaactgtcgccctacctggcgctgggcatgatctcgcatcgccagtgcctgcacgcggtg
atgagcaacaacgagggccacctggccgacggcgatgccggcctcaccgcctgggccaat
gaattggtctggcgcgagttctatctgcatatcgccgccagctttcccgacatcaatcgc
cactgcccctttcagtcgcatacaaaggccttggcctggcgcgacgatgacgcggggttt
caggcttggtgcgaagggcgtacaggctaccccctggtcgacgccgcaatgcgccagctc
gtccattgtggatggatgcacaatcgcctgcgcatggtagtggcgatgttcttgtccaag
cacttgctgatcgactggcgtcgcggcgaggccttcttcatgcggcatctcatcgatggc
gacttcgcctccaacaatggcggctggcagtgggccgcctccactggcaccgacgccgcg
ccctatttccgtatcttcaatcccaccacgcaggcggaacgtttcgaccccgaggggcga
ttcatcgcgcaatggctccccgaactggccgagctccccgtcaagtcacgctttttcccc
gacgagtcgcaacgccgccggaccggctatgccacacccatcgtcgaccacaaggcagca
cgtcaacgcgcgctggacgccttcaagtcactgacgacgtaa
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