Chromohalobacter canadensis: SR908_10280
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Entry
SR908_10280 CDS
T09637
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccag
Chromohalobacter canadensis
Pathway
ccag03030
DNA replication
ccag03410
Base excision repair
ccag03420
Nucleotide excision repair
ccag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR908_10280 (polA)
03410 Base excision repair
SR908_10280 (polA)
03420 Nucleotide excision repair
SR908_10280 (polA)
03440 Homologous recombination
SR908_10280 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccag03032
]
SR908_10280 (polA)
03400 DNA repair and recombination proteins [BR:
ccag03400
]
SR908_10280 (polA)
Enzymes [BR:
ccag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR908_10280 (polA)
DNA replication proteins [BR:
ccag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SR908_10280 (polA)
DNA repair and recombination proteins [BR:
ccag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SR908_10280 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SR908_10280 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WQH07873
LinkDB
All DBs
Position
2143628..2146399
Genome browser
AA seq
923 aa
AA seq
DB search
MANTPPIVLVDGSSYLYRAFHALPPLTTSKGNPTGAVKGVLNMLKSLLKQYPQSPMAVVF
DAKGKTFRDEIYAEYKAHRPPMPDDLRPQVEPLHECIRALGLPLLCIEGVEADDVIGTLA
RQATEAGRDAVISTGDKDMAQLVNAHITLVNTMKGETLDTGGVEDKFGIPPSLIIDYLAL
MGDKVDNIPGVPGVGEKTALGLLQGMQGGLETLYADLERIKTLDFRGAKTLGKKLDANRD
QAFLSYQLATIKTDCELPVGLDDLDIAHPDREALKALYTELEFKNWLNELLEGRDEGVDD
VRSGDAVDATQGPVASTTEATVRTDHVIVTREDFDAWLARLSEADIFCFDLETTSLNYME
ADIVGIGLSLEPGEAAYIPVAHSYIDAPDQLDRATVLDALKPLWEDAAKAKIGQNLKYDI
SVLARYDIEVAGRLEDTMLASYVLNATATRHDMDSLALKYLGEKTISFEEIAGKGAKQLT
FDQVALEEAAPYACEDVDITLRLHRELRPRVDGEGQLAAVLDEIELPLVPVLSHMERNGV
ALDAERLHTQSRALDKRLRELETRAYELAGREFNLGSPKQLGEILFDELKIPVLKKTPKG
APSTAEAVLEELALDYPLPKVIIEHRGFAKLKSTYTDKLPQLVNPTTRRLHTSYHQAVTA
TGRLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSGDKGLLE
AFAEGRDIHTATAAEVFGVALDAVSGEQRRSAKAINFGLIYGMSAWGLGRQLHIERNQAQ
TYIDRYFDRYPGVARFMERIRAQAADDGYVETVFGRRLYLPEINAQNRTRRQATERTAIN
APMQGTAADVIKLAMIDVDRWLREGDFDAWMVMQVHDELVFEVAESQVDAFTDAIRQRME
SAAKLDVPLTVEANAGDNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggccaacacgccccccatcgttctcgtcgacggctcgtcgtacttgtatcgggctttt
cacgccttgccgccgctgaccacgtccaaaggcaatcccaccggcgcggtgaagggcgtg
ctcaacatgctcaagagcctgctcaagcagtatccacaaagccccatggcggtggtcttc
gacgccaagggcaagaccttccgcgacgagatctatgccgagtacaaggcgcaccgcccg
ccgatgcctgacgatctgaggcctcaggtcgaaccgttgcacgagtgcattcgtgcgctg
ggcctgccccttttgtgcatcgagggcgtcgaggccgacgacgtgatcggcaccttggcg
cgccaggccaccgaggcgggacgcgacgcggtgatttccaccggcgacaaggacatggcg
cagctcgtcaatgcccacatcacgctggtcaacaccatgaagggcgagacgctcgatacg
ggcggcgtcgaggataagttcgggattcccccgtcgctgatcatcgactacctggcgttg
atgggcgacaaggtcgacaacatccccggcgtaccgggtgtcggcgagaagaccgcactc
ggcttgctgcaaggcatgcaaggcggactcgagaccctttacgccgatctcgagcgtatc
aagaccctggactttcgcggcgccaagacgctgggcaagaaactcgacgccaatcgcgat
caggccttcctgtcctatcaactggcgacgatcaagaccgattgcgagctaccggtgggg
ctcgacgatctggatatcgcgcaccccgaccgcgaggcgctcaaggcgctatacaccgag
ctggagttcaagaactggctgaacgagctgctcgaggggcgtgatgagggcgtcgacgat
gtccgctcgggcgatgcggtggatgccacgcagggccctgtggcgagcactaccgaggcg
actgtgcggacggatcacgtcatcgtcacccgcgaggacttcgatgcctggctcgcgcgt
ctgagcgaggcggatatcttttgcttcgacctggaaaccaccagcctcaactacatggag
gccgatatcgtgggcatcggcctgtcactggagcccggcgaagcggcctatatcccggtg
gcgcacagctatatcgatgcgcccgaccagcttgatcgcgccacggtgctggatgcgctc
aagccgctgtgggaagacgccgccaaggccaagatcggccagaacctcaagtacgatatt
tccgtgctggcgcgttatgacatcgaagtcgcgggtcggctcgaggacaccatgctggcg
tcctatgtgctcaacgccacggcgacgcgccacgacatggactcgctggcactcaagtat
ctcggcgagaagaccatttccttcgaggagatcgccggcaagggcgccaagcagttgacc
ttcgatcaggtcgcactcgaagaagctgcgccctacgcctgcgaagatgtcgacatcacc
ctgcgtctgcaccgtgaattgcgcccacgcgtggacggtgaaggccagctggcggcggtg
ctggacgagatcgagctgccgttggtaccggtgctctcgcatatggaacgcaacggcgtg
gcgctggacgccgagcgcctgcatacccagagccgcgcactggataaacgcttgcgcgaa
ctggaaacccgcgcctatgagctggccggccgtgagttcaaccttggctcgcccaagcaa
ctcggcgagattctcttcgatgaactcaagattccggtgctcaagaagacgcccaagggc
gcgcccagcaccgccgaggcagtgctcgaggaactggcgctggattatccgttgcccaag
gtgatcatcgagcatcgcggcttcgccaagttgaagtcgacctacaccgataagctgccg
caactggtcaatcccaccacgcggcgcctgcacactagctatcatcaggccgtgacggcc
accgggcgtttgtcctcgtccgatcccaacctgcagaacattcccatccgtaccgaagaa
ggccgcaagatccgccaggccttcgtcgcgcgccccggctaccgcatcgtcgctgccgac
tattcgcagatcgagttgcgcatcatggcgcatctttccggcgacaaggggttgctcgag
gccttcgccgaggggcgcgacatccacaccgccaccgcggcggaggtgttcggcgtggcg
ctcgacgccgtcagtggcgagcaacggcgcagcgccaaggctatcaacttcggtctgatc
tacggcatgagtgcctgggggctggggcggcagttgcatatcgagcgcaatcaggcgcag
acctacatcgaccgctacttcgaccgttaccccggcgtggcacgcttcatggagcgtatt
cgtgctcaggccgccgacgatggttatgtcgaaacggtcttcggccgtcgcctctatctg
cctgagatcaacgcccagaaccggacccggcgtcaggccaccgagcgcaccgccatcaac
gcgccgatgcagggtaccgccgccgatgtcatcaaactggcgatgatcgacgtcgaccgc
tggctacgcgagggcgacttcgacgcctggatggtgatgcaggtccacgacgaactggtc
ttcgaagtcgcggaaagccaggtcgacgccttcaccgatgccatccgccagcgcatggaa
agcgccgccaagctcgacgtaccgctgaccgtcgaagccaacgctggcgacaactgggac
gaagcgcactga
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