Chromohalobacter canadensis: SR908_11980
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Entry
SR908_11980 CDS
T09637
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ccag
Chromohalobacter canadensis
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccag03400
]
SR908_11980
Enzymes [BR:
ccag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SR908_11980
DNA repair and recombination proteins [BR:
ccag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SR908_11980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WQH08189
LinkDB
All DBs
Position
complement(2527639..2529213)
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AA seq
524 aa
AA seq
DB search
MSKTLRLVLGDQLSLTLPILESAPENAVIALCEVDEEGRYVPHHPQKIAMMLAAMRHFAT
TLRQRGFQVHYSSLDDTDNAQQLIPEAERVAQLHGCDEIQVTLPGEWRLAKAIESRRISR
VGPRWRVLEDTRFFCSRQRFAQWMEGRKRPRMEDFYRMMRRHTGMLMEEDAPVGGQWNFD
HDNRLPIDDAPPPPSAPRHRQDALTREVLALVATHFADHFGTLAGFNWPVTRRQALADLR
HFITHALPCFGHYQDAISDKSPYLFHSRLSAALNIGLLLPDEVCKAAEDAWRRGAAPLNA
VEGFIRQILGWREYVRGIYWHHMPDYKRDNRLAAERGLPACYWNGDTDLRCLKRAIEMTH
DNAYAHHIQRLMVTGNFALLCDVRPAALCDWYLAVYADACEWVELPNTLGMVLHADGGYL
GSKPYCASGKYIDRMSDHCTQCRYDPRQSVGDDACPFNALYWRFLERHADPLADNPRMRV
IYGTLNKMSTEKRRALREQAETFLDTLTWTLPYGQGQHATDYGE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacattacgcttggtcctaggcgaccaactcagcctgacgcttcctattcta
gagtcagcaccggaaaatgcggtcatcgctctctgcgaagtcgatgaagagggtcgctac
gtcccccaccaccctcagaaaatcgccatgatgctggccgcgatgcgacatttcgccacc
accctgcgacagcggggattccaggtgcattacagctccctcgacgataccgacaatgcg
cagcaactgatccccgaggccgagcgagtggcccaattgcatgggtgtgacgagatccag
gtgaccctgcccggcgagtggcgcttggcaaaagccatcgagtcacgccgcataagccgc
gttggcccccgctggcgggtactcgaagacacgcgtttcttttgttctcggcaacgcttt
gcccaatggatggaaggacgaaaacggcctcgcatggaagacttctaccgcatgatgcga
cgccataccggcatgctcatggaagaagacgcacctgtcgggggacaatggaacttcgat
cacgacaatcgacttcccatcgatgacgcaccgccgccaccctctgcgcctcgacaccgc
caggatgcactgacacgcgaggtgttggcgctcgtggcaacgcatttcgctgatcatttc
ggcacgctggcgggcttcaactggcccgtcacacggcgtcaggcacttgccgacctgcgg
catttcatcacccatgcgttgccttgtttcgggcattatcaggatgccatcagcgataag
tcgccctacctctttcactcgcgactctccgccgcgctcaatatcggcctactattgccc
gacgaagtctgcaaggccgccgaggacgcttggcggcgtggcgcggcgcccctcaacgcg
gtcgagggattcatccgacaaatcctgggctggcgagaatacgtgcgcggcatttactgg
catcacatgcccgactacaagcgtgacaaccgcctcgctgccgaacgagggcttcccgca
tgctactggaatggcgacaccgatttgcgctgcctcaaacgcgccatcgaaatgacgcat
gacaatgcctatgcgcatcacatccagcgcctgatggtcactggcaacttcgccctgctt
tgcgacgtgcgtcccgccgctttgtgcgactggtatcttgccgtctacgccgatgcctgc
gaatgggtcgaactgcccaacacactgggcatggtcctgcatgccgacggcggttacttg
ggctccaagccctattgcgcctcgggcaagtacatcgatcgcatgtcggaccactgcact
cagtgtcgctatgatccacgccaaagcgtgggcgacgatgcatgtccgttcaacgccttg
tactggcgcttcctggaacgccatgccgacccgcttgccgataatccgcgcatgcgcgtc
atctacggcacactcaacaagatgtcgactgagaagcgtcgggcattgcgcgaacaggcg
gagacttttctcgatacgctgacgtggacgctcccttatggacaagggcagcatgcaaca
gattatggagagtaa
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