Chromohalobacter canadensis: SR908_13140
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Entry
SR908_13140 CDS
T09637
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ccag
Chromohalobacter canadensis
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccag03000
]
SR908_13140
Transcription factors [BR:
ccag03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SR908_13140
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
SBP_bac_11
HTH_24
HTH_20
MarR
MarR_2
HTH_11
HTH_Tnp_ISL3
hNIFK_binding
HTH_AsnC-type
HTH_30
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
WQH08412
LinkDB
All DBs
Position
complement(2802499..2803434)
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AA seq
311 aa
AA seq
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MKIERLPLNALRAFSEAARAGSFKTAAERLSVTPGAVSRQIKQLEERLGVALFERHANGV
HVTDAGHLLAEDVDAGLARIANGVQAVHERAHAATTLTLSAPPSFTQFWLLPRLADFEAQ
ESHVEISLDADQDLSDPIWHGDGARLALRYGRGPWPGVRSKRLLEDSLFPVCSPALLERS
PIDTPADLLAHPLLEVVWQSRQNVDFPGWRDWFDAAGLPGKTLPIQQRYSLYGLALDQAI
AGRGIMLANPAVVADRLASGVLVRPFGDRHVIDSPFTYDLILPATGQAPPAIQRFIDWLL
SEAARFQGEIG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagagcgactgcccctcaacgcactgcgtgccttctcggaagcagcacgagct
ggcagcttcaaaacggcagcggagcgtttgtctgtgactcccggcgcggtcagccgacaa
atcaagcaactcgaagaacggctgggcgtggcacttttcgagcgtcatgccaacggcgtg
cacgtaaccgatgccggccacctgctggccgaggatgtcgatgccggtctggcgcgcatc
gccaacggcgtacaagccgttcatgaacgtgcccatgcggccaccacgctgaccctcagc
gccccgccctcattcactcaattctggctactcccacgcctggcagacttcgaggcgcag
gaaagccatgtcgagatctccttggacgcagaccaggacctgagcgacccgatatggcac
ggcgacggcgcacggctcgccctgcgctacggacgcggcccctggcccggcgtcaggagc
aagcggctcctcgaagactcgctgttccccgtctgctctcccgccctgcttgaacgctcc
cccatcgacacgcccgccgacctgcttgcccatccattgctcgaggtggtctggcaatcg
cgacagaacgtcgacttccccggctggcgagactggttcgacgccgccgggctaccgggc
aagacactgccgattcagcagcggtattccctctacggcctggccctcgaccaagcgatc
gccgggcgcggcatcatgctcgccaacccggcagtcgtcgccgaccgcctcgccagcggc
gtactggttcggcccttcggtgatcgccacgtaatcgattcgccgttcacctacgacctg
atcctccccgccaccggccaggccccgcccgcgatccaacgcttcatcgactggctgctc
agtgaggcggccaggtttcagggggagatcggttag
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