Chromohalobacter canadensis: SR908_14840
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Entry
SR908_14840 CDS
T09637
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccag
Chromohalobacter canadensis
Pathway
ccag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SR908_14840
09124 Replication and repair
03420 Nucleotide excision repair
SR908_14840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccag03021
]
SR908_14840
03036 Chromosome and associated proteins [BR:
ccag03036
]
SR908_14840
03400 DNA repair and recombination proteins [BR:
ccag03400
]
SR908_14840
Enzymes [BR:
ccag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SR908_14840
Transcription machinery [BR:
ccag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SR908_14840
Chromosome and associated proteins [BR:
ccag03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SR908_14840
DNA repair and recombination proteins [BR:
ccag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SR908_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PAS-like
Motif
Other DBs
NCBI-ProteinID:
WQH08734
UniProt:
A0ABZ0YAW6
LinkDB
All DBs
Position
3188187..3190508
Genome browser
AA seq
773 aa
AA seq
DB search
MSEAVDYTVAVRTLCDFTAKQGDLDLRFTPSPSAEEGMEGHARVASRRASHYQCEVALSG
VYWSAAGQGLRVRGRADGFDPQRGRLEEIKTHRGDLTRQPENHRHLHWAQLRLYGWLLCE
ARGLDELELALVYFDIARQVETPLVERVGRETLRHFFEAQCAAFLDWALQETAHRGARDS
ALEALRFPHASWQGEQRMLAENVYKAASTGRALLAQAPTGTGKTLGTLFPMLKAMPTQRL
DGLCYLAAKTPGRQLALDALKPVVETTPLRVLELTARDKACEHPDLACHGESCPLAAGFF
DKLPDARRALIADGDWDRAHLRDTALAHDVCPYYLGQEMARWSDVTVGDYHYYFASGGLL
HLLAQSNDWRLGVLVDEAHNLVERARDMYSASLDQGDLRALIREKPAGVSAALKQLNREW
NSLGRECVNEHTALERVPEAWLAALQRLVGTIGQVAAEPPYTLSPALQRFYFDALKTVRI
AELFDRHFVCDIAMRAGHRGMRHARLSLRNIVPAPLLTPRFQAAHASVLFSATLTPERYQ
RDLLGLPEDSVWLDVASPFAKEQLSVHIAQHISTRFRDREASLAPIADLIATTYTRRPGN
YLAFFSSFAYLEDVAARLRETHPDVPQWQQARGMDETARADFLARFTPDGCGVGFAVLGG
AFGEGIDLPGDRLIGAFIATLGLPQVNPVNEQRRRYLQAMFGAGYDYAYVYPGVQKVIQA
AGRVIRSREDRGTIHLIDDRFAEPRIQALLPSWWHVTHNVDNQARNPGGASLG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcagtggattatacggtggcggtgcgcaccctgtgtgatttcaccgctaaa
cagggcgatctcgacttgcgtttcacgccatcgcccagcgctgaagagggcatggaaggg
catgctcgagtggcctcgcgtcgcgcctcccattaccaatgcgaagtcgccttgagcggt
gtctattggagcgctgccgggcaaggcttgcgagtgcgtgggcgtgcggacggtttcgat
ccgcaacgtggacgcctggaagagatcaagacccatcgcggtgatctgacgcgtcaaccg
gagaaccatcgtcatctgcattgggctcagttgcgtctttacggctggttgctgtgcgag
gcgcggggcctcgacgaactcgagctggcgctggtgtatttcgatatcgcccgccaggtc
gagacaccgctcgtcgaacgcgtgggccgtgaaaccttgcgtcatttcttcgaggcgcag
tgcgccgctttcctcgattgggcgttgcaggaaacggcgcaccgtggggcacgcgatagc
gccctcgaggcgctgcgttttccgcatgcgagctggcagggcgagcagcgcatgctggcg
gaaaacgtctacaaggcggccagtaccgggcgcgcgctgctggcccaggcgccgacgggc
accggcaagactctgggcacactctttccgatgctcaaggcgatgcccacgcaacgcctc
gatggcctgtgctatctcgctgccaagactcccggacgccagctggcgctggatgcgctg
aaacccgtggtggaaacgacgccgctgcgcgtgctggagctgaccgcgcgcgacaaggcc
tgtgagcatcccgaccttgcctgccatggggagtcctgcccgttggcggcgggctttttc
gataagctgcctgacgcacggcgcgcactgatcgccgatggcgactgggatcgcgcgcat
ttgcgcgataccgccttggcgcatgacgtctgcccgtattacctgggccaggaaatggcg
cgctggagcgatgtcacggtcggtgattatcattactacttcgccagtggcggcttgttg
catctgttggctcagtccaacgattggcgcctgggcgtgctggtcgatgaggcacacaat
ctggtcgaacgcgcgcgtgacatgtacagcgcgagcctcgatcaaggcgatttgcgcgcc
ctgatacgcgagaaacccgccggcgtcagcgccgcactcaagcagctcaatcgcgagtgg
aattcgctgggccgtgagtgtgtcaatgagcataccgcgctcgaacgcgtccctgaggcg
tggttggccgcgttgcagcgcctggtggggacgatcgggcaagtggcggccgagccgcct
tatactttgtcaccggccttgcagcgtttttatttcgatgccttgaagacggtgcgcatc
gccgaactgttcgatcgtcatttcgtttgcgacatcgccatgcgggcgggccaccgcggc
atgcgccatgcgcgcctgagtctgcgcaacatcgtgccggcgccattgctgaccccgcgt
ttccaggccgcacatgccagtgtgttgttttcggccaccctgacgcccgagcgttatcag
cgcgatctgttggggttgcccgaggacagtgtgtggctggacgtggcgtcgccctttgcc
aaggaacagctcagcgtgcatatcgcgcagcacatttctacgcgctttcgcgaccgcgag
gcatcgttggcacctatcgccgacttgatcgccacgacctatacgcgtcggccgggcaat
tatctggccttcttcagcagcttcgcctatctggaagatgtggccgcgcgtttgcgcgag
acgcatcccgatgtgccgcaatggcaacaggcgcggggcatggacgaaacggcacgggcg
gatttcctggcgcgtttcacgccggacggctgcggggtcgggttcgcggtactcggcggt
gccttcggcgagggcatcgatcttccgggtgatcgactgatcggtgccttcatcgccacc
ttggggctgccgcaggtcaatccggtcaacgagcagcgtcgacgctatctacaggcgatg
ttcggtgccggctacgactatgcttacgtctatcccggggtacagaaggtgattcaggct
gctgggcgcgtcattcgctcccgcgaggaccggggcacgattcatctgatcgacgatcgc
ttcgccgagccccgcattcaggcgttattgccgtcgtggtggcatgtcacccacaacgtt
gacaaccaggctcgcaacccgggcggtgcttctctagggtag
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integrated database retrieval system
