Chromohalobacter canadensis: SR908_15810
Help
Entry
SR908_15810 CDS
T09637
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccag
Chromohalobacter canadensis
Pathway
ccag00521
Streptomycin biosynthesis
ccag00523
Polyketide sugar unit biosynthesis
ccag00525
Acarbose and validamycin biosynthesis
ccag00541
Biosynthesis of various nucleotide sugars
ccag01100
Metabolic pathways
ccag01110
Biosynthesis of secondary metabolites
ccag01250
Biosynthesis of nucleotide sugars
Module
ccag_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ccag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SR908_15810 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SR908_15810 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SR908_15810 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SR908_15810 (rfbB)
00525 Acarbose and validamycin biosynthesis
SR908_15810 (rfbB)
Enzymes [BR:
ccag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SR908_15810 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
NmrA
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
WQH08914
LinkDB
All DBs
Position
3393855..3394937
Genome browser
AA seq
360 aa
AA seq
DB search
MAKTFLVTGGAGFIGSAVVRELIASTGHRVVNVDKLTYAGNLESLEAVSESPRYSFIQAD
IGDAQAMHQAFEHHQPDVVMHLAAESHVDRSIDGPAEFIQTNVVGTTVLLEAARSYWKGL
QEQNPAKAEAFRFHHISTDEVYGDLDGPEGFFTETTSYSPSSPYSASKAGSDHLVRAWQR
TFGLPTLITNCSNNYGPYHFPEKLIPLMILNGLDGKSLPVYGNGQQVRDWLYVEDHARAL
IKVASEGTVGETYNIGGHNEKTNLEVVETLCQLLDELVGTAHLKPGTSHLELITFVTDRP
GHDLRYAIDAGKIERELSWRPQETFESGLRKTVQWYLSNETWWRRVQDGSYQGQRLGMGA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgtttcttgtcactggcggcgctggttttatcggatcggcagtcgtgcgt
gagttaatcgccagcactggccatcgcgtggtgaacgtcgacaagctgacctatgccggc
aacttggaatctttggaagccgtgtccgagagccctcgctatagcttcatccaggccgac
attggcgatgcccaagcgatgcaccaagctttcgagcatcaccagcccgatgttgtgatg
catctagctgccgagagccacgtagaccgttctatcgatggcccggccgagttcatccag
accaatgtggtgggcaccacggtgttgctggaggccgcgcgcagttattggaagggtctg
caggagcagaatccggccaaagctgaggcttttcgcttccaccatatttccaccgacgaa
gtgtatggtgacctggatgggccagaaggcttcttcaccgaaacaacctcttattccccc
agttctccgtattcagccagcaaggctgggtccgatcacttggtgcgtgcctggcagcga
acctttggcctgccgacccttatcacgaattgttccaacaattacggtccttaccacttc
cccgaaaaactgatcccgttgatgatcctcaatgggctggatggtaaatcgttgcccgtc
tacggcaatggacagcaggttcgcgactggctttacgtggaagaccatgcgcgtgcgttg
attaaagtcgcgtcagaaggaacggtaggcgagacctacaacatcggtggtcataacgag
aagaccaatctcgaggtcgtcgaaacgttatgccagctgttggatgagctcgtgggcacc
gcacacctcaagcctggtacctcgcatctggagctcattactttcgtgacggatcgtcct
ggccacgacctgcgctacgcgattgatgccggcaaaatcgagcgtgaactcagctggcgc
ccacaagagactttcgaaagcggcctgcgtaaaacggtacagtggtatttgagcaatgag
acttggtggcgacgcgtgcaggatggcagctatcaaggccaacgtttggggatgggagct
taa
DBGET
integrated database retrieval system