KEGG   Chromohalobacter canadensis: SR908_15950
Entry
SR908_15950       CDS       T09637                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
ccag  Chromohalobacter canadensis
Brite
KEGG Orthology (KO) [BR:ccag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccag03016]
    SR908_15950 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ccag02048]
    SR908_15950 (vapC)
Transfer RNA biogenesis [BR:ccag03016]
 Prokaryotic type
  tRNA degradation factors
   SR908_15950 (vapC)
Prokaryotic defense system [BR:ccag02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SR908_15950 (vapC)
SSDB
Motif
Pfam: PIN PIN_12
Other DBs
NCBI-ProteinID: WQH08939
UniProt: A0ABZ0YA75
LinkDB
Position
complement(3427428..3427838)
AA seq 136 aa
MLKYMLDTNICIYTIKNKPPSVREIFKRHHSQMCISSITLMELVYGAEKSSNPEHNIAVV
ESFAARLEVLPYDNDAAAHTGQLRAELAKAGTPIGPYDQMIAGHARSQGLIVVTNNLREF
ERVSGLRLDDWTTHAP
NT seq 411 nt   +upstreamnt  +downstreamnt
atgctgaaatacatgctcgacaccaatatttgcatttatacgatcaagaacaaaccaccc
tcggtgagagagatcttcaagcgccaccacagtcaaatgtgcatcagttccatcacgctg
atggaactcgtctatggcgcggagaaatccagtaaccccgagcacaacatcgccgtcgtc
gaaagcttcgcagcgcgtctggaagttctgccttacgataacgatgccgctgcccatact
ggccaactaagagccgaactcgcgaaagcgggtacccctatcgggccttacgatcagatg
atcgcgggtcatgcacgctcacagggcctgattgtcgtcaccaacaacctacgtgaattc
gagcgagtttcggggctgcgcctggatgactggacgactcatgccccatga

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