Crenobacter cavernae: DWG20_03650
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Entry
DWG20_03650 CDS
T09767
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ccah
Crenobacter cavernae
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccah03021
]
DWG20_03650 (rpoH)
Transcription machinery [BR:
ccah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DWG20_03650 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
GAAD
HTH_PafC
HTH_AsnC-type
KORA
UCR_14kD
HTH_28
RNase_J_b_CASP
FrhB_FdhB_C
Motif
Other DBs
NCBI-ProteinID:
AXK38591
UniProt:
A0A345Y3T9
LinkDB
All DBs
Position
739090..739953
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AA seq
287 aa
AA seq
DB search
MTATFALPVPSASGSLEQYIQGVNSVPMLTAEEENALATRFSEHQDLDAAKQLVMSHLRV
VVSIARGYSGYGLPHADLIQEGNIGLMKAVKRFEPNRGVRLFSFAVHWIKAEIHEFILRN
WRLVRVATTKPQRKLFFNLRSMKSTFSALSDKEARHIAEQLGVKPEEVREMETRMSGQDI
ALMADDGDDEGFAPIDWLADSEHEPTRRLEKQAFDRLQSRGLIEALGSLDARSRRIVEAR
WLADDGGATLHELAAEFGVSAERIRQIEAKALQKMKAAIGTRDAALV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgactttcgccttgcccgtcccttctgccagcggcagcctggagcagtacatc
cagggcgtgaacagcgtcccgatgttgaccgccgaagaggaaaacgcgctcgcgacccgc
ttctccgaacaccaagacctcgacgccgccaagcagctggtgatgtcgcacctgcgcgtc
gtagtgtcgatcgctcgcggttactccggctacggcctgccgcacgccgacctgatccag
gaaggcaatatcggcctgatgaaggcggtcaaacgcttcgaaccgaaccgcggcgtgcgc
ctgttttcgttcgccgtgcactggatcaaggccgagatccacgaattcatcctgcgcaac
tggcgcctggtgcgcgtggccacgaccaagccgcagcgcaagctgttcttcaacctgcgc
agcatgaagtcgaccttctcggcgctgtccgacaaggaagcgcgccacatcgccgaacag
ctcggcgtgaaacccgaggaagtgcgcgagatggaaacgcgcatgagcggccaggacatc
gcgctgatggccgacgacggcgacgacgagggcttcgcgccgatcgactggctggccgac
agcgagcacgaaccgacgcgtcgcctcgaaaagcaggcgttcgaccgcctgcaaagccgg
ggcttgatcgaagcgctgggctccctcgacgcgcgtagccgccgcatcgtcgaggcgcgc
tggctggccgacgacggcggcgcgacgctgcacgaactggccgccgagttcggcgtgtcg
gccgagcgcatccgccagatcgaagccaaggcgctgcagaagatgaaggcggcgatcggc
acgcgcgacgcggcgctggtctga
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integrated database retrieval system
