Crenobacter cavernae: DWG20_03855
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Entry
DWG20_03855 CDS
T09767
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ccah
Crenobacter cavernae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_9
TPR_16
TPR_7
Motif
Other DBs
NCBI-ProteinID:
AXK38628
UniProt:
A0A345Y3X6
LinkDB
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Position
778185..780611
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AA seq
808 aa
AA seq
DB search
MNSLILNGVAVALLCAALPAHSVPLWKRADYVQAIRSARDGAPASALRILEPLHRAGTLQ
QPLVDDYLTLLVWAGRDDEAVALAEGRYPAYMLGPGALNILARHQRDRGHYEAAESLYRT
SLRKQATASASAGLAMTLAEAGRKSEGMAVLDAATAAGAADALALDRARSYLLAMSDEHT
AALTEMQALLARHPDDPELARSYASLLVRIGAPHEAYAYLKQRDIAAPALYNRMLLDKAA
IETRWGKSETRLEVGENRFRMTDLALASNEQAGLGLLPGDLAARRTAVADRLVALEQRAR
YRDAIALHRQHADDAQPRYALAAAASAYLAEEQPLEAIRLSRQAMDGTPRRDVPIDWRIT
LVYAHLEAEQPDEARAELESLEQDVQRIRYDAPSGQNRFNPAYQQVRLLSAMFDAYVGRT
RSARGRLDALLEDAPFNGELRQDDGELELMRGHPRAAADIFGRRLVDDPRAVEAKRGLAA
AHLDSHRYADVPLLVADVAALAPESPSTRKLLERWKWSRRPQLVIDAERELSGSRGEGDD
GGWGVETRLYSAPIASHWRAFARSYSSRADFVGGGRSRRDTVGLGAEYRGPAWSAEGALT
GGRNGGGGFVAATRSFDDRFSAGLRYEHDSDQVPMRARRDGVDGNRLAAEFAYRVDDHRR
FDAAVSALDLSDGNLRERIGGSWTERWLVGPSYTLDTVLSVGASRNRGATGVGYFNPRKD
GEVGLTVLQEGLLWRRYDASFRHRLGLYAAHYRQEGYGGKPASAAFYEQEWRWASRAGLR
YGIAHTVHPYDGDSDVANRLYFNFDWRF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgttgattttaaatggagtggcggtcgcgcttctctgcgcggcgctaccggct
cattccgttccactatggaaacgagccgactacgtccaggccattcgttcggcgcgcgac
ggggctccggcctcggcacttcgaatactggagccgctccatcgggcggggacgctgcaa
cagccgctggtcgacgattatctgacgctgctcgtctgggccgggcgggacgacgaggcc
gtggcgctggccgaaggccgctaccctgcctacatgctcggccccggcgcgctcaatatt
cttgcgcgccatcagcgcgaccgcggccattacgaggcggccgaatcgctgtaccggacc
tcgctacggaaacaggcgaccgcgtccgcgagcgccgggctcgcgatgacgttggccgag
gccggcaggaaaagcgaagggatggcggttctcgacgcggccaccgcggccggtgcggcg
gatgcgctcgcgctggaccgcgcacgaagctatctgctcgcgatgtccgacgagcacacg
gccgccctcacggaaatgcaggccctgctcgccaggcatcctgacgaccccgagctggcc
aggtcctacgcttcgctgctcgtgcgcatcggcgccccccacgaggcgtacgcctatctg
aagcagcgcgatatcgcggcgccggccctctacaaccgcatgctgctggacaaggccgcc
atcgaaacccgctggggcaagagcgagacgcggctcgaggtcggcgaaaaccggttccgg
atgaccgatctcgcgctggccagcaacgaacaggccgggctcggcctgctgccgggcgac
ctagcggccaggcgaaccgccgtcgcggaccgcctggtcgcactcgaacagcgcgcccgc
tatcgcgacgccatcgctcttcatcgacagcacgccgacgacgcccagccccgttacgcg
ctggcggcggcggctagcgcctatctcgccgaagagcagccgctcgaagcgatccgcctc
tcaaggcaggcgatggacggcacgccgcgcagggacgtcccgatcgactggcgcatcacc
ctcgtctacgcgcatctggaagccgagcagcccgacgaggcgcgtgccgagctcgagtcg
ctcgagcaggacgtgcagcgcatccgctacgacgcgcccagcggccagaaccgcttcaac
cccgcttatcagcaggtgaggctgcttagcgcgatgttcgacgcctacgtcggccgaacc
cgctcggcgaggggccggctcgacgcgctgctcgaagacgcccccttcaacggcgaattg
cgtcaggatgacggcgaactcgagctgatgcgcggccacccgcgcgcggcggcggacatc
ttcgggcgccggctggtcgacgatccgcgcgcggtcgaagccaagcgcggattggcggcc
gcccatctggacagccaccgctacgcggacgtgcctctgctcgtcgccgacgtcgccgcg
ctcgcgccggaaagcccgtcgacgcgcaagttgcttgaacgctggaaatggagccggcgc
ccgcagctggtcatcgatgccgaacgcgagctatccggcagccgcggcgagggagacgac
ggcggctggggcgtggagacccggctttacagcgcgccgatcgcgtcccactggcgggct
ttcgcccgctcctacagctcgcgcgccgacttcgtcggcggcgggcgctcacggcgcgac
acggtcggcctcggcgccgaataccgaggccccgcatggtcggccgagggcgcgctgacc
ggcggccggaacggtggcggcggcttcgtcgctgcgacccgcagcttcgacgaccggttc
agcgccggcctgcgctacgagcacgacagcgaccaggtcccgatgcgggcgcgtcgggac
ggtgtcgacggcaaccgcctcgccgccgaattcgcctaccgggtcgacgaccatcgccgt
ttcgacgccgccgtttccgcgctcgacctctccgacggaaacctgcgcgagcgcatcggc
ggctcgtggacggaacgctggctcgtcggaccgagctatacgctggacaccgtcctgtcg
gtcggcgcgagcaggaaccgcggcgcgaccggcgtgggctacttcaacccgcgcaaggac
ggcgaggtcgggctgaccgtgctgcaggaggggctgctctggcgccgctacgacgccagc
ttccggcaccggctcggcctctacgcggcccactaccggcaggaaggctacggcggaaaa
ccggcttcggccgccttctacgaacaggaatggcgctgggcgtcgagggcgggcctgcgc
tacggcatcgcccacaccgttcatccctacgacggcgacagcgacgtggccaaccgcctc
tatttcaacttcgactggcgcttctga
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integrated database retrieval system