Crenobacter cavernae: DWG20_07655
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Entry
DWG20_07655 CDS
T09767
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ccah
Crenobacter cavernae
Pathway
ccah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DWG20_07655 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccah03400
]
DWG20_07655 (recD)
Enzymes [BR:
ccah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DWG20_07655 (recD)
DNA repair and recombination proteins [BR:
ccah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DWG20_07655 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
UvrD-helicase
AAA_22
Helicase_RecD
UvrD_C
T2SSE
AAA_16
nSTAND3
FtsK_SpoIIIE
nSTAND_NTPase7
ATPase
SLFN-g3_helicase
AAA_25
AAA_28
DEAD
TrwB_AAD_bind
Rad17
SRP54
AAA_24
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXK39314
UniProt:
A0A345Y5W2
LinkDB
All DBs
Position
1582197..1583900
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AA seq
567 aa
AA seq
DB search
MPHDDARAPQLTALFKRLDPALPCEVERLVGRLINANGAGHVCLPLSGAEARSLAGTSIV
GRAGGYAPLIVDAQRRLYFARHWYDEHRLAATLARLAREALPVDAAEARGQLDALFGADA
GSRQRLAAALALRQRFLLIAGGPGTGKTTTVVRLLALIAATSGRPPVIAMAAPTGKAAAR
LSESVRAARDALPVSAAVKALLPERAQTLHRLLGLAPGAARARHHKGAPLPLDVLVVDEG
SMVDLSMMARVADALPSSARLIVLGDPDQLASVEAGSVLADLAVGEAWRPDTVSWLAEAG
CAAPPESGAAVLPDCVVRLTESHRFDAKSAIGRLARAVNAGDAADAEALLDDPAEPDAAW
LFAPDGLVAALFAARAGYFELVKKGAAPDALFAAFSRHMLLCSERRAVENMNRAFEARLE
AAGLKTVGADWYPGRAVMVTVNDYAVGLFNGDVGILVETLSENGPVRRVLFPEPDGGFRA
LAPGRLPAHETVFAMTVHKSQGSEFDEVWLALLGEGSASRALVYTAITRARRRFALAATP
AQLASALACGASRASGLADQLAAQADG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgacgacgcgcgcgcgccgcagcttacggcgctgttcaagaggctggaccca
gcgctgccctgtgaggtcgaaaggctggtcgggcgcctgatcaacgcgaacggcgccggc
cacgtctgcctgccgctgtcgggcgcggaggcgcgctcgctcgccggcacgtccatcgtc
ggccgggccggcggctacgcgccgctgatcgtcgacgcgcagcgccggctctatttcgcg
cgccactggtacgacgagcaccggctggcggcgacgctggcgcggctcgcgcgcgaggcg
ctgccggtcgacgcggcggaggcgcgggggcagctcgacgcgctgttcggcgccgatgcc
ggatcgcgccagcggctggccgccgcgctggcgttgcggcagcgtttcctgctgatcgcc
ggcggccccggcaccggcaagacgacgaccgtcgtgcggctgctggcgctgatcgccgcg
accagcgggcgcccgccggtgatcgcgatggcggcgccgaccggcaaggcggcggcgcgg
ctgtccgaatcggtgcgcgccgcgcgcgacgcgctgccggtgtcggcagcggtgaaggca
ttgctgcccgagcgcgcgcagaccttgcaccggctcttgggcctcgcgcccggcgccgca
cgcgcgcgccaccacaagggcgcgcccttgccgctcgacgtgctggtcgtcgacgaggga
tcgatggtggacctctcgatgatggcgcgcgtcgccgacgcgctgccttcgagcgcgcgg
ctgatcgtgctcggcgacccggaccagctcgcatcggtcgaggccggcagcgtgctcgcc
gacctcgccgtcggcgaggcgtggcggccggacacggtgtcatggttggccgaggcgggt
tgcgcggcaccgcccgagagcggcgccgcggtgctgcccgactgcgtggtgcggctgacc
gaaagccaccgcttcgacgcgaaaagcgcgatcggccggctcgcgcgcgcggtcaacgcc
ggcgacgccgcggacgccgaagcgctgctcgacgacccggccgagcccgacgccgcgtgg
cttttcgcgcccgacggcctcgtcgccgccttgttcgccgcgcgcgccggctatttcgag
ctggtgaaaaagggcgctgcgcccgacgcgctgttcgcggcgttctcgcgccacatgctg
ctttgcagcgaacgccgcgcggtggaaaacatgaaccgggcgttcgaggcgaggctggaa
gccgcggggctgaagacggtaggtgccgactggtatccgggccgcgcggtgatggtcacc
gtcaacgactacgcggtcggcctgttcaacggcgacgtcggcatcctggtcgagaccttg
tccgagaacggcccggtgcggcgcgtgctgttccccgagcccgacggcggctttcgcgcg
ctcgcgccggggcgcctgccggcgcacgagacggtgttcgcgatgacggtgcacaagagc
cagggttcggaattcgacgaggtgtggctcgcgctgctcggcgagggctcggcgtcgcgc
gcgctcgtctataccgcgatcacgcgcgcgcgccgccgtttcgcgctcgccgcgacgccg
gcccaactggcttcggcgttggcttgtggcgcgtcgcgcgcgagcggactggccgatcag
ctggccgcgcaggcggacggctga
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