Crenobacter cavernae: DWG20_07750
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Entry
DWG20_07750 CDS
T09767
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccah
Crenobacter cavernae
Pathway
ccah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWG20_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccah03400
]
DWG20_07750
Enzymes [BR:
ccah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DWG20_07750
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DWG20_07750
DNA repair and recombination proteins [BR:
ccah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWG20_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AXK39331
UniProt:
A0A345Y5X9
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All DBs
Position
complement(1601133..1601963)
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AA seq
276 aa
AA seq
DB search
MPELPEVETTKRGVSPTLTRARVDAVTVRCAALRWPVPPELAATLEGATVLSVTRRAKYL
LIGFAHGTLIVHLGMSGSLRFVPPGTPPEKHDHVDLVLSPVGAMPTVLRYRDPRRFGAWL
WHAGAPEHHPLLTRLGPEPLSDAFSGEHLYKVTRNKSVAIKQALMDNALVVGVGNIYANE
ALFHAGIRPTRPAKRLTRDDCARLAETIKAVLARAIEAGGSSLRDFVGAGGEPGYFQQTY
YAYGRAGEACRHCGATIEAIRQGQRSSYYCPHCQPC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgaaaccacgaagcgcggcgtgtcgccgacgctgacccgc
gcgcgcgtcgacgccgtcaccgtacgctgcgcggccctgcgctggccggtgccgccggag
ctggccgcgacgctcgagggcgcgaccgtgctgtcggtgacgcggcgcgccaaatacctg
ctgatcggcttcgcgcacggcacgctgatcgtgcacctcgggatgtcgggcagcctgcgt
ttcgtgccgcccggcacgccgcccgagaagcatgaccacgtcgacctcgtgctgtcgccc
gtaggcgcgatgccgaccgtgctgcgctaccgcgatccgcggcgcttcggcgcgtggctg
tggcacgccggcgcgcccgagcatcatccgctgttgaccaggctcggccccgagccgctg
tccgacgcgttcagcggcgagcatctttacaaggtgacgcgcaacaagagcgtcgcgatc
aagcaggcgctgatggacaacgcgctggtggtcggcgtcggcaacatctacgcgaacgag
gcgctgttccacgccggcatccggccgacgcggccggcgaaaaggctgacgcgcgacgac
tgcgcaaggttggccgagacgatcaaggcggtgctggcacgcgcgatcgaggccggcggc
agcagcttgcgcgacttcgtcggcgcgggcggcgagccgggctacttccagcagacgtat
tacgcgtacggccgcgccggcgaagcatgccggcactgcggcgcgacgatcgaggcgatc
cgccagggccagcgcagctcgtactattgcccgcattgtcagccgtgctag
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