Crenobacter cavernae: DWG20_09785
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Entry
DWG20_09785 CDS
T09767
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ccah
Crenobacter cavernae
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccah03032
]
DWG20_09785
03036 Chromosome and associated proteins [BR:
ccah03036
]
DWG20_09785
03400 DNA repair and recombination proteins [BR:
ccah03400
]
DWG20_09785
DNA replication proteins [BR:
ccah03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DWG20_09785
Chromosome and associated proteins [BR:
ccah03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DWG20_09785
DNA repair and recombination proteins [BR:
ccah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DWG20_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Repressor_Mnt
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AXK39714
UniProt:
A0A345Y712
LinkDB
All DBs
Position
2012505..2012822
Genome browser
AA seq
105 aa
AA seq
DB search
MTKSELIARLAERLAERDSELVYKDAELAVKTILDAMASSLAQGQRIEIRGFGSFDLNYR
PPRVGRNPKSGSSVSVPEKYVPHFKAGKELRERVDGTIRQDELVS
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagctgattgcgaggctggccgaacgccttgccgagcgcgattctgag
ttggtctacaaggacgccgagctggccgtcaaaaccatcctggatgcgatggccagcagc
ctggcccaagggcagcggatcgagatccgcggcttcggtagcttcgacctgaactaccgt
ccgccgcgcgtcggccgcaacccgaagtcgggttcgagcgtctccgtgccagagaagtac
gtgccgcatttcaaggccggcaaggagctgcgggagcgggttgacggaaccatccgtcaa
gacgagctcgtctcctga
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integrated database retrieval system
