Crenobacter cavernae: DWG20_10185
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Entry
DWG20_10185 CDS
T09767
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ccah
Crenobacter cavernae
Pathway
ccah02020
Two-component system
ccah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DWG20_10185
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DWG20_10185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ccah02022
]
DWG20_10185
02035 Bacterial motility proteins [BR:
ccah02035
]
DWG20_10185
Two-component system [BR:
ccah02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
DWG20_10185
Bacterial motility proteins [BR:
ccah02035
]
Flagellar system
Flagellar assembly proteins
Others
DWG20_10185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_2
HTH_30
HTH_28
AAA
AAA_3
AAA_19
HTH_23
MerR
Sigma70_r4_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXK39777
UniProt:
A0A345Y775
LinkDB
All DBs
Position
2098069..2099448
Genome browser
AA seq
459 aa
AA seq
DB search
MKSLPILVVEDDADLREALVDTLELAGYLVLSAVDGGAALEVLRCEPVGLIVSDAQMAPM
DGYSLFDEVKRRYPGVPFILMTAYGVIERAIALLRAGATHYLLKPFEPATLIAEVEKHLL
KLPAGDEDGEALAASPRMKELLSLARRVAVSDATVLLSGPSGAGKEVLARFIHRHSRRAD
GPFVAVNCAAIPDSLLEATLFGHEKGAFTGATAAMPGKFEQAQGGTLLLDEISEMPLPLQ
AKLLRVLQEREVERVGGSRTIKLDIRVLATSNRDMSAEVDAGRFREDLYFRLNVFPLKLP
SLAERRDDILPLARRLLRRYSEAAGNAGLVLSSEAERRLTAHSWAGNIRELENVVQRAVI
LAAGAEILAVDLMLPDASGTVAPFPAVSPENDPDAAPAHDMRTLEKRHILDTLATVGGVK
KLAAEKLGISERTLRYKLQRYREESLDAEKGCPEHGKME
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccctgccgattctggtcgtcgaggacgacgccgacctgcgcgaagcgctggtc
gataccctcgaactcgccggctacctggtgctgtccgccgtcgacggtggagcggcgctc
gaagtcttgcgctgcgagccggtcggcctgatcgtgtccgacgcgcagatggcgccgatg
gacggctactcgctgttcgacgaggtcaagcgccgctatccgggcgtgccgttcatcctg
atgaccgcctacggtgtgatcgagcgcgcgatcgcattgttgcgcgccggcgccacgcat
tacctcttgaagccgttcgagccggcgacgctgatcgccgaggtcgaaaagcatctgctg
aagctgccggccggcgacgaggacggcgaggcgctcgccgcgtcgccgcgaatgaaggag
ctgctgtcgctggcgcgccgcgtcgccgtcagcgacgccaccgtactgctgtccgggccg
tcgggcgccggcaaggaagtactcgcgcgcttcatccaccgccattcgcgccgcgccgac
gggcctttcgtcgcggtcaactgcgcggcgatccccgattcgctgctcgaagcgacgctg
ttcggccacgagaagggcgcgttcaccggcgcgaccgcggccatgcccggcaagttcgag
caggcgcagggcggcaccttgctgctcgatgagatctccgagatgccgctgcccttgcag
gccaagctgttgcgcgtgctgcaggagcgcgaggtcgagcgcgtcggcggcagccgcacg
atcaagctcgacatccgggtgctggcgaccagcaaccgcgacatgtcggccgaggtcgac
gccgggcgctttcgcgaagacctgtacttccggctcaacgtcttcccgctgaaactgccg
tccttggccgagcgccgcgacgatatcttgccgttggcacgtcgcttgcttaggaggtat
tcggaggccgccggcaacgccggcctggtcctctcgagcgaggcggagcgtcgattgacg
gcccatagttgggcgggtaacatccgcgagctggaaaatgtcgtgcagcgggcggtgatt
cttgccgccggggcggaaattcttgccgtcgacctgatgctgccggatgcttccggtacc
gtggccccgttccctgccgtctcgcccgaaaatgatcccgacgccgctcccgcgcacgat
atgcgcacactggagaagcgtcatatcctggataccctggcgaccgtcggcggcgtgaaa
aagcttgccgccgagaaactgggcatcagcgagcgcacgctgcgctacaagttgcagcgc
taccgcgaagaatcgctcgatgccgagaaaggttgcccggaacatggcaagatggagtga
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