Crenobacter cavernae: DWG20_12180
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Entry
DWG20_12180 CDS
T09767
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ccah
Crenobacter cavernae
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccah03009
]
DWG20_12180
Enzymes [BR:
ccah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DWG20_12180
Ribosome biogenesis [BR:
ccah03009
]
Prokaryotic type
rRNA helicases
DWG20_12180
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXK40143
UniProt:
A0A345Y891
LinkDB
All DBs
Position
2501557..2502942
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AA seq
461 aa
AA seq
DB search
MMSDLFSSLPLPAEQLANLEQLGYATMTPIQAASLPVMLSGGDLIAKAQTGSGKTAAFGL
GLLARLNPRYFGTQALVLCPTRELADQVAKEIRRLARFADNIKVLTLCGGSPIGPQRASL
EHGAQVLVGTPGRIIDHLDRGTLKLDALKTLVLDEADRMVDMGFYDEMVRINDACPRPRQ
TLLFSATYPDTIRKQSARFLKNPAEVSVDALHGDERIAQTFYEVDAEGRADAVVKLLRHH
RPTSAIAFCNTKARCRELVDALSAKGIAALALSGELEQRERDEVLVRFSNKSCTLLVATD
VAARGLDVAGLDLVINVDITPDPEIHVHRIGRTGRAGESGRAVSLSTPFDARRAAAIEEY
LGRPLSWASLADLPKPDPTPLVPAMVTLQILGGRKDKVRPGDILGALTGDAGLPGSAVGK
IALFDRVSYVAVERKVAAQAQKRLAEGGIKGKAAKVRQIGD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtctgatcttttttccagtctgccgctgccggccgagcagctcgccaacctcgaa
caactcggctacgcgacgatgacgccgatccaggcggcgagcctgcccgtcatgctttcc
ggtggagacctgatcgccaaggcgcagaccggcagcggcaagaccgccgccttcggtctc
gggctgctcgcgcggctcaacccgcgctatttcggcacgcaggcgctggtgctgtgcccg
acgcgtgaactggccgaccaggtggcgaaggaaatccgccgtcttgcgcgcttcgccgac
aacatcaaggtgctgacgctgtgcggcggcagcccgatcggcccgcagcgcgcgtcgctc
gaacacggcgcgcaggtgctggtcggcacgccgggccgcatcatcgaccacctcgaccgg
ggtacgttgaaactcgatgcgctgaagacgctggtgctcgacgaggccgaccgcatggtc
gacatgggcttctacgacgagatggtgcgcatcaatgacgcctgcccgcgcccgcgccag
acgctgctgttctcggcgacctacccggatacgatccgcaagcagagcgcgcgcttcttg
aagaacccggcagaagtgtcggtcgacgcgctgcacggcgacgagcgcatcgcgcagacc
ttctacgaggtcgacgctgaagggcgcgccgacgcggtggtcaaactgctgcgccaccat
cggccgacgtcggcgatcgcgttctgcaacaccaaggcgcgctgccgcgaactggtcgac
gcgctgtcggccaagggcatcgccgcgctggcgctgtcgggcgagctcgaacagcgcgag
cgcgacgaagtgctggtgcgtttttcgaacaagagctgcaccttgctcgtcgcgaccgac
gtcgccgcgcgcggcctcgacgtcgccgggctcgacctggtgatcaacgtcgacatcacg
cccgaccccgagatccacgtgcaccgcatcggccgtaccggccgcgccggcgaatcgggc
cgcgcggtcagcctgtcgacgccgttcgacgcgcgccgtgcggcggcgatcgaggagtat
ctcggccggccgctgtcctgggcgagtctggccgacctgcccaagcccgacccgacgccg
ctggtgccggccatggtgacgctgcagatcctcggcggccgcaaggacaaggtgcgcccc
ggcgacatcctcggcgcgttgaccggcgacgccggcctgccgggcagcgcggtcggcaag
atcgcgctgttcgaccgcgtcagctacgtcgccgtcgaacgcaaggtggcggcgcaggcg
cagaaaaggttggccgagggcggcatcaagggcaaggccgccaaggtgcgtcagatcggc
gactga
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