KEGG   Crenobacter cavernae: DWG20_12375
Entry
DWG20_12375       CDS       T09767                                 
Name
(GenBank) ATP-dependent helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
ccah  Crenobacter cavernae
Pathway
ccah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DWG20_12375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccah03019]
    DWG20_12375
Enzymes [BR:ccah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DWG20_12375
Messenger RNA biogenesis [BR:ccah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DWG20_12375
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA ERCC3_RAD25_C AAA_22 Cas3-like_C_2 Helicase_C_2
Other DBs
NCBI-ProteinID: AXK40173
UniProt: A0A345Y8C1
LinkDB
Position
2536578..2537840
AA seq 420 aa
MTFSSLGLIEPLLKTLDTIGYQTPTPVQVQTIPAILARRDLMAAAQTGSGKTAGFALPLL
QRLAMEGPQVASNSVRALVLVPTRELAEQVHQSFREYGTHLPLRTDVVYGGVSINPQMMK
MRRGLDILVATPGRLLDLLDHNALRLSAVSILVLDEADRLLDMGFADEIGRILAQLPKDR
QNLFFSATFPPAVQALAEKMLRNPARIEVQPAPTVEATIRQRAIEVDASRRTQLLCHLIH
ESCWDRVLVFVATKHSAEQLADKLGKAGIKAAAFHGELSQGARSHVLAEFKACRLQVVVA
TDVAARGIDIEQLPAVVNYDLPRSAVDYIHRIGRTGRAGESGTAVSFISAASEPHFRLIE
KRQRLRLSREQISGFEPIATTAPVTALMTASLAGPSTGGIKGKRKSKKDKLREAVARKND
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgacgttctcctccctcggtttgatcgaaccgctgttgaaaaccctcgacaccatcggc
taccaaacgcctacgccggtgcaggtgcagacgattccggcaattctggctaggcgtgat
ctgatggcggcggcgcaaaccggtagcggcaagaccgccggctttgcgttgccgctcttg
caacgtctggccatggagggcccgcaagtggccagcaattcagtgcgcgccttggtgctg
gtgccaactcgcgaactggctgagcaggtgcatcagagctttcgtgaatacggcacgcac
ctgccactgcgcaccgatgtggtttacggcggggtaagcatcaacccgcagatgatgaaa
atgcgcagaggcctcgacatcctggtcgccacaccaggccgcttgctcgacttgctagac
cacaatgcacttaggctttctgcggtctcgatactggtgctggatgaggcggatcgcctg
ctggatatgggctttgccgacgagatcgggcgtatcctggcgcagcttccgaaggatcgc
caaaacctgttcttctccgccacttttccgcccgcagtacaggcgctcgctgaaaagatg
ctacgcaatccggcccgcattgaggtgcaacccgcgccgaccgtcgaagctaccatccgg
cagcgagccattgaggtcgatgccagccgccgcacccaattgttatgtcatctgattcac
gaaagctgctgggaccgggtgcttgtttttgttgccaccaaacactctgcggaacagcta
gccgacaagctgggcaaagccggaatcaaggcagccgccttccatggcgaactcagtcaa
ggtgcacgcagccatgtcttggcagaattcaaagcttgccgattgcaggtggtcgtcgcc
acggatgtcgccgctcgcggtatcgacattgagcaattgcctgccgtggtgaactacgac
ctgccgcgatccgcggtcgactacattcaccgcatcggccgcaccggccgcgcgggcgaa
agcggtaccgcggtcagcttcatcagtgcggcctccgaaccgcatttccggctcatagaa
aagcgtcaacgcctccgcctgtcacgcgaacaaatctcgggctttgaacctatcgcaacc
acggcaccagtcactgcattgatgactgcgtcattagcagggccctctaccggcggtatc
aaaggtaaacgcaagagcaagaaagacaagctacgcgaagccgttgcacgcaaaaatgat
tag

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