Crenobacter cavernae: DWG20_13845
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Entry
DWG20_13845 CDS
T09767
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccah
Crenobacter cavernae
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccah03016
]
DWG20_13845
Enzymes [BR:
ccah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DWG20_13845
Transfer RNA biogenesis [BR:
ccah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DWG20_13845
Prokaryotic type
DWG20_13845
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AXK40425
UniProt:
A0A345Y923
LinkDB
All DBs
Position
complement(2848466..2849386)
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AA seq
306 aa
AA seq
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MSKPRRIRRAVNGVLLLDKPLGVSSNGALQKVRWLYNAAKAGHTGVLDPLATGLLPVCFG
EATKFSSFLLDADKGYRATVKFGVVTTTGDAEGEVVKERPVDVTIETLAEACARFKGMIS
QVPPMYSALKFEGKALYEYARAGIEIERKARDVTIHSIEIVEFAGDVAVIDVACSKGTYI
RTLAEEIGETLGCGAHLIGLRRTATAGFPLEAAMTLEAIEALSAEGRDALLMPADVLVAH
FPEVSLDEDAAGRFLHGQAVRVAQNHAIMSRFRVYREATREFMGLAEWKADGLLHPTRLL
AVSTAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgcgccgcatacgccgcgccgtcaacggcgtgttgctgctcgacaagcca
ctcggcgtgagcagcaacggcgcgctgcagaaggtgcgctggctatataacgccgccaag
gcgggccataccggtgtgctcgacccgctggcgaccggcttgttgccggtgtgtttcggc
gaggcgaccaagttttcgtccttcctgctcgacgccgacaagggctaccgcgcgacggtg
aaattcggcgtggtgaccacgaccggcgacgccgagggcgaggtggtgaaagagcgcccg
gtcgatgtcacgatagagacgttggccgaggcctgtgcgcgcttcaaggggatgatcagc
caggtgccgccgatgtactcggcgctcaagttcgagggcaaggcgctgtacgagtatgcg
cgggccggcatcgagatcgagcgcaaggcgcgcgacgtgaccatccactcgatagaaatc
gtcgaattcgccggcgatgtcgctgtgatcgacgtcgcctgcagcaagggcacgtatatc
cgcaccttggccgaggagatcggcgagacgctcggctgcggcgcgcacctgatcggtctg
cgtcgcacggcgacggcgggttttccgctcgaggcggcgatgacactcgaggcgatcgag
gcgctgtcggcggaggggcgcgatgcgttgctgatgccggccgacgtgctggtcgcacac
ttccccgaagtgtcgctcgacgaggatgccgccggtcgtttcctgcatggccaggcggtg
cgcgtcgcgcaaaaccatgccataatgtcgcgctttcgcgtgtaccgagaggcgacgcgc
gaattcatgggtctggcggagtggaaggccgacggtcttcttcacccaaccaggctcctg
gccgtctcgacggccgcttga
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