Crenobacter cavernae: DWG20_14875
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Entry
DWG20_14875 CDS
T09767
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ccah
Crenobacter cavernae
Pathway
ccah00906
Carotenoid biosynthesis
ccah01100
Metabolic pathways
ccah01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
DWG20_14875 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccah01006
]
DWG20_14875 (hpnD)
Enzymes [BR:
ccah01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
DWG20_14875 (hpnD)
Prenyltransferases [BR:
ccah01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DWG20_14875 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Mad3_BUB1_II
Motif
Other DBs
NCBI-ProteinID:
AXK40606
UniProt:
A0A345Y9K4
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All DBs
Position
complement(3068443..3069288)
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AA seq
281 aa
AA seq
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MTPDEYCEDKTAKSGSSFYYSFRFLPDAQRRALTALYAYCREVDDVVDECKDEAVARAKL
AWWRLELSRLYTGAPNHPVTRALQPHIQAFDLPEAWFLEIVDGMEMDLNYARYSGFSDLL
LYCHRVAGVVGQLSAQIFGYQDKKTLKYAHELGVAFQLTNIIRDVGEDARRGRIYLPVEE
LERFNVPAADIQNYRETPEFKALMAFQIERALGHYRQAWELLPAVDRKPQKVGLAMAAIY
RATLEEIRIDGPERVLNQRLSLTPLRKLWLAWKTATFGYKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccgacgagtattgcgaggacaagaccgcgaagagcggttcgagcttctattac
agcttccgctttctgcccgacgcgcagcggcgcgcgctgaccgcgctctacgcgtattgc
cgcgaggtcgatgacgtcgtcgacgagtgcaaggacgaggccgtcgcgcgcgccaagctc
gcatggtggcggctcgagctgtcgcggctgtacaccggcgcaccgaaccatccggtgacg
cgcgcgctgcaaccgcatatccaggcgttcgacctgcccgaggcgtggttcctcgagatc
gtcgacggcatggagatggacctcaactatgcgcgctactcgggcttttccgacctgttg
ctgtactgccaccgcgtcgccggcgtggtcggccaactgtcggcgcagatcttcggctat
caggacaagaagacgctaaagtacgcgcacgagcttggtgtcgccttccagctgaccaac
atcatccgtgacgtcggcgaggacgcgcgccgcggccgcatctatctgccggtcgaagag
ctcgaacgcttcaacgtgccggccgccgacatccagaactaccgcgaaacgcccgagttc
aaggccttgatggcattccaaatcgagcgcgcgctcggccattaccgccaggcgtgggaa
ctgctgccggccgtcgaccgcaagccgcagaaggtcggcctcgcgatggcggcgatctac
cgcgcgacgctcgaggaaatcaggatcgacggccccgagcgcgtgctgaaccagcgcctg
tcgctgacgccgctgcgcaagctgtggctcgcgtggaaaacggcgaccttcggctacaag
gcgtga
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