Crenobacter cavernae: DWG20_15555
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Entry
DWG20_15555 CDS
T09767
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ccah
Crenobacter cavernae
Brite
KEGG Orthology (KO) [BR:
ccah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccah01011
]
DWG20_15555
Enzymes [BR:
ccah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DWG20_15555
Peptidoglycan biosynthesis and degradation proteins [BR:
ccah01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DWG20_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
SLT_2
LysM3_NFP
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
AXK40721
UniProt:
A0A345Y9W9
LinkDB
All DBs
Position
3202036..3204063
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AA seq
675 aa
AA seq
DB search
MKKLTPLALSLSLLFAVPAAEADSSAFSRSVGVDEGQAIGLDMMLLNSSLLRNGDNVWTR
VREGFQMTEVNPGLVERHERQFASKPEYFKRSLDRSRKYLFHIMNEVERRGMPTEIALLP
VVESAFVATAQSPVGASGLWQFMPATGRHYGLEQTWWYDGRRDVVESTRAALDYLEYLNS
LFGDWSLALAAYNWGEGNVSRAIARAQAAGQVASYENLRMPAETRNYVPKLLAVRNLLAT
PDKYGLKLDRFPNKPYFVSVSTGRHMDIDVAAKLADMPVSEFKSLNPGFNLPVYAHKNGR
QMLIPADKLSRFEKNLDRWNKPLLTWQVVTPGGDDTVESVAGRYGMDSSELVAVNNLRGG
SLSAGRPLLVAKRGGDDGAAMADTDSAPMTSTVTTANASRGNAPENADLTRATVVVASAA
PAPKAVPTKPVAAATPAHVEAAVETAASVNTTPAIVVAQAAPLEKPAAPTPALAAPAAAN
SALAAYLAEGAADTIRPTTVALTTPPAADAPVLVAKAEAATVASVVKPEPAKAVIAVANP
TASRYTVAQGDTLYNISRRYKLSVTELMALNGLGEDSTVKLGQQLKVKGAPTLLASAAKP
VNAQDEAVSHTAGLKSSERQPTAQTVSAEYVVQKGDTVFSIARKFGVRHSDIQRWNDSDM
LVRLSPGQRVRVQGL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctcactccgctcgcgctttcgctgtcgctattgttcgccgtaccggctgcc
gaagcggattcgagcgctttttcccgctcggtcggcgtcgacgaaggccaggcgatcggc
ctcgacatgatgctgctcaacagcagcctgcttcgtaacggcgacaacgtctggacccgc
gtacgcgaaggcttccagatgaccgaggtcaaccccgggctcgtcgaacgccacgaacgc
cagttcgcgtccaagcccgaatacttcaaacgcagcctcgaccgcagccgcaaatacctg
ttccacatcatgaacgaggtcgagcgccgcggcatgccgaccgagatcgcgctgttgccg
gtagtcgagagcgcttttgtcgcgaccgcgcagtcaccggtcggcgcgtcgggcctgtgg
cagttcatgccggccaccggccgccactacggtctcgagcagacctggtggtacgacggg
cggcgcgacgtggtcgaatcgacgcgcgccgcgctcgattatctggaatacctgaacagc
ctgttcggcgactggtcgctcgcgctcgccgcctacaactggggcgagggcaacgtgtcg
cgcgccatcgcccgcgcgcaggcagccggccaggtcgccagctatgaaaacctccgcatg
ccggccgaaacgcgcaactacgtccccaagctgctcgcggtgcgcaatctgttggccacg
ccggacaaatacggcctgaagctcgaccgcttcccgaacaagccctacttcgtctcggtc
tcgaccggccgccacatggacatcgacgtcgccgccaagctggccgacatgcccgtctcc
gaattcaagtcgctgaacccgggcttcaacctgccggtgtacgcgcacaagaacggccgc
cagatgctgatcccggccgacaagctcagccgcttcgaaaagaacctcgaccgctggaac
aagccgctgctgacctggcaggtggtcacgcccggcggcgacgacaccgtagagagcgtc
gccggccgctacggcatggacagtagcgaactcgtcgcggtgaacaatctgcgcggcggc
agcctgtccgccggccgcccgctgctggtcgccaagcgcgggggcgacgacggcgcagcg
atggccgacaccgacagcgcgccgatgacgtcgaccgtgacgacggcgaacgccagccgc
ggcaacgccccggaaaacgccgacctgacgcgcgccaccgtggtcgtcgccagcgccgcg
ccggcgccgaaagcagtccccaccaaaccggtcgccgcggccacgccggcccacgtcgaa
gccgccgtcgagacggccgcttcggtcaataccacgccggccatcgtcgtcgcgcaggcg
gctccgttggaaaaaccggccgccccgaccccggccctggcggcccccgcggcagcgaac
agcgcgctcgccgcctatctcgccgaaggcgcggccgacacgatccggccgacgaccgtg
gcgctcaccaccccgccggcggccgatgcgccggtgctcgtcgccaaggccgaagcggca
accgtcgccagcgtcgtgaaaccggaaccggccaaggccgttattgctgtcgccaacccg
accgcaagccgctacaccgtcgcccaaggcgacacgctctacaacatctcgcgccgctac
aagctctcggtcaccgaactgatggcgctcaacggtctgggcgaagacagcaccgtgaag
ctcggccaacagttgaaggtgaaaggcgccccgacgctgctcgccagcgcggcgaaaccc
gtcaacgcgcaggacgaggccgtgtcgcacacggccggcctcaaatcttccgagcgccag
ccgacggcgcagaccgtgtcggccgagtacgtcgtgcaaaagggcgacaccgtgttcagc
atcgcgcgcaaattcggcgtgcgccactcggacatccagcgctggaacgattcggacatg
ctggtccgcctctcccccgggcagcgcgtgagggtgcaaggcctgtaa
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