Conexivisphaera calida: NAS2_0036
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Entry
NAS2_0036 CDS
T06635
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccai
Conexivisphaera calida
Pathway
ccai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAS2_0036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccai03021
]
NAS2_0036
Transcription machinery [BR:
ccai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NAS2_0036
Prokaryotic type
Archaeal type
TFE
NAS2_0036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TrmB
Integrase_Zn
HTH_9
Zn_ribbon_RPB9
Sigma70_r3
wHTH-PRTase_assc
HTH_Crp_2
Zn_Ribbon_TF
DUF7560
Zn_ribbon_6
DNA_ligase_ZBD
zf_CopZ
Motif
Other DBs
NCBI-ProteinID:
BBE41450
UniProt:
A0A4V0P1E6
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All DBs
Position
complement(42177..42764)
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AA seq
195 aa
AA seq
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MPKLEYEDSFVKVASLLGSEDFVKVARALLNNPESTDEEIASATGLKINRVRKVLYELQS
RSLIYAIRVRDPKRDWYVYRWKVQPEGAEVFLATVKRRLLNRLKIKLEYEKEHQFYHCGS
ATCPKRTFEEAVELVFTCPECGNHLEYYDNSELLKAIEWKISQLEEELRSFGGAKRIEVG
ENEEEGSEDVNEEAS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaactggagtatgaggattccttcgtgaaggtcgcgagcctactagggagcgag
gacttcgtgaaggtcgcgagggctctgttgaacaacccggagtcaaccgacgaggagata
gcgagcgcaactggcctcaagataaaccgcgtcagaaaggtcctctacgagctgcagagt
agatccctgatctacgccataagggtgcgcgatccaaagcgcgactggtacgtctaccgc
tggaaggtccagccggagggagcggaagtcttcctggcgaccgtgaagagaaggttgctg
aaccgcttgaagataaaacttgagtatgagaaggagcaccagttctatcactgcgggagc
gcgacgtgcccgaagaggacgttcgaggaggcggtggagctggtgttcacgtgtcccgag
tgtggaaaccacctggagtattacgataactcggagctcctgaaggccatcgagtggaag
atatcccagctggaggaagagctcaggtcattcgggggagcgaagaggatcgaggtcggg
gagaacgaggaggaaggctcggaagacgtcaacgaggaagcgagctga
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