Conexivisphaera calida: NAS2_0163
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Entry
NAS2_0163 CDS
T06635
Name
(GenBank) RNA-binding protein, containing S1 domain
KO
K07573
exosome complex component CSL4
Organism
ccai
Conexivisphaera calida
Pathway
ccai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAS2_0163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccai03019
]
NAS2_0163
Messenger RNA biogenesis [BR:
ccai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NAS2_0163
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NAS2_0163
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GFIT
Motif
Pfam:
Zn_ribbon_NUD
Zn_ribbon_RPAB4
FtrD-like
DUF1451
HypA
DUF4315
Motif
Other DBs
NCBI-ProteinID:
BBE41564
UniProt:
A0A4P2VAQ3
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All DBs
Position
complement(162363..162950)
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AA seq
195 aa
AA seq
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MKGTSAKDREGKAAPGDGLAVIEEAIPFGDFYVDLQGIVRATKVSTFELKALLKELKVRG
IPMRSQVPKPGDYVVGTVDEDLPEDMYSITIYKINNEETKAGITAILVTGRRPRGRGEGA
PVELNDIVRAKILGVVDGIAFAALSDDRCGVLWTRCSRCGGKVARQHGGYVRCLKCGNRE
YRRLAPDFLSVDAIS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcacgagcgctaaggatcgcgagggaaaggccgcaccgggagatggactggcg
gttatagaggaggcgataccattcggggatttctacgtggacctgcagggcatcgtgcgc
gccaccaaggtgtcaacgttcgagctcaaggcgctgctcaaggagctcaaggtccgcggc
ataccaatgaggagccaggttccgaagcccggggactacgtcgtggggaccgtggatgag
gatctcccggaggacatgtacagcataacaatatacaagataaataacgaggagaccaag
gcaggaataactgcaatactggtgactgggaggaggccacgggggcgcggagaaggggca
cccgtggagctcaacgacatagtgcgggccaagatactgggcgttgtggacggtatagcc
ttcgcggcgctctccgatgataggtgcggcgtcctctggaccaggtgcagcaggtgcggg
gggaaggtcgccagacagcatggcggctacgtgagatgcctgaaatgcggaaacagggag
tatcgcaggctcgcgcccgacttcctctcggtcgacgccatctcgtga
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